| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1286 |
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| Symbol | |
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| ID | 8252386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1522251 |
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| End bp | 1523636 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934941 |
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| Product | Alpha-N-acetylgalactosaminidase |
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| Protein accession | YP_003091564 |
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| Protein GI | 255531192 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATA GAAGAGATTT TTTAAAACTG ACCAGCATTG CAGGGGCAGG GCTTCTTGCA
GGATGCGCTA CCAGAAATGC AAGTGCTGGT ACTGGTATAA AAATGCATAA CCGGAATTAT
ACCCAAAAAT TCAACATGTC TGGCTATGCT GCCCCAAAAT TACAAACCGT TCGCGTTGGT
TTTATAGGAG TAGGTAACCG GGGAACTTCA GCAGTAACAA GGATGAGTAA AATAGAAGGT
GTAGAAATCA AAGCCATATG CGATTTACGA CCTGAAAAAG CTCAGGCTGC CAAAAGAAAT
ATCGCAAATA CCCCACATAG GCCAGATCTT TATACCGGAG GGGAAAACGA ATGGAAAAAA
ATGTGCGAAC GCAATGATAT CGACCTGGTT TACATCGCTA CACCATGGAA TTTACATACC
CCCATGGCAG TATTCTCCAT GGAACATGAT AAGCATGCTG CTGTGGAAGT GCCTGCAGCC
GAAACGCTTG AAGAGTGCTG GCAATTGGTC GAAACTTCTG AAAAGACAAA AAAGCATTGC
ATGATGCTGG AAAACTGTTG TTATGATTTC TTTGAACTGC TTACTTTAAA TATGGCACGT
CAGGGTTTCT TTGGCGAGAT TGTTCATGCA GAAGGCGCTT ATTTACATGA TCTGCTGGAT
GAAAACTTCT CCAAAACACA GTATCAGGGC ATGTGGCGTT TAAAAGACAA TTACAAAAGC
GGTAACTTAT ATCCTACACA TGGGTTAGGG CCTGTTGCAC AGGCAATGGA CATTAACCGG
GGCGATAAGA TGGATTATCT GGTATCAGTA TCCAGTAATG ATTTTATGAT GGCCGCAAAG
GCTAATGAAC TTGCTGCAAA GGATGATTTT TATAAAGAAT TTGCTGGCAA AAGTTTCCGG
GGAAATATGA ATGTAACCAC CATCCGGACC AGTAAGGGTA AAACCATTAT GATCCAGCAC
GATGTAACCT CACCACGCCC TTATTCAAGG TTACACACCA TCAGCGGTAC CAAAGCCATC
GCCCAGAAAT ACCCGCTTCC TGCACGCATT GCCACCAATC ATTTAAACTG GGTAACACCG
GAAGAAATGA AAGTGCTTGA AGAAAGATAT CAGCCGGCCA TTGTAAAGAA AATTGGTGAA
ATGGCAAAAA AAGTTGGTGG ACATGGGGGG ATGGACTTCA TGATGGACTG GCGCCTGATC
GATTGTTTGC GCAACGGTTT GCCTTTGGAC ATGGACGTAT ATGATGCGGC TACCTGGAGC
TCGATAAAGC CATTAAGTGA AATATCAGTA GCCAACCGTT CCAATTCTAT TGATGTGCCC
GATTTTACAG GTGGTTCATG GAAAACGAAC AAACAGGTTG ACCTTACCTT AAGTCATCTT
AAGTAA
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| Protein sequence | MNNRRDFLKL TSIAGAGLLA GCATRNASAG TGIKMHNRNY TQKFNMSGYA APKLQTVRVG
FIGVGNRGTS AVTRMSKIEG VEIKAICDLR PEKAQAAKRN IANTPHRPDL YTGGENEWKK
MCERNDIDLV YIATPWNLHT PMAVFSMEHD KHAAVEVPAA ETLEECWQLV ETSEKTKKHC
MMLENCCYDF FELLTLNMAR QGFFGEIVHA EGAYLHDLLD ENFSKTQYQG MWRLKDNYKS
GNLYPTHGLG PVAQAMDINR GDKMDYLVSV SSNDFMMAAK ANELAAKDDF YKEFAGKSFR
GNMNVTTIRT SKGKTIMIQH DVTSPRPYSR LHTISGTKAI AQKYPLPARI ATNHLNWVTP
EEMKVLEERY QPAIVKKIGE MAKKVGGHGG MDFMMDWRLI DCLRNGLPLD MDVYDAATWS
SIKPLSEISV ANRSNSIDVP DFTGGSWKTN KQVDLTLSHL K
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