| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1260 |
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| Symbol | |
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| ID | 8252358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1489675 |
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| End bp | 1491732 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644934913 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003091538 |
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| Protein GI | 255531166 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.296024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.398588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATC AATTTATAAA GAAAGCATTT AGTGCATGTG GTTTAGGTTT AGCTTTACTA
TTGACCACAC CATCATGTAA GTTAGATGAA TACAATCCTA ATGCGCTTGC GGAAGAGGAT
GTGCTCAGGG ATTTTAACGG GTTCAGATCG TTTCAATCTA ACATTTATAC CGGGCTTTGG
GGCTCATTGA TTGGCATGCC GTATGGATTT TTATCCGAAA CCGGAACCGA TTTATGGACA
TCGCCAACCA ATGGTGTGAG CAACAGACAA GTGATGCGGT ATGAGGAGTT TACCAACAAT
TTTAACCTGG TTACCAATAC CTGGGATTTT GCATGGGGCT CGATCAAAGA TTGCAATAAA
ACCATAGAAA TTGCTCCGCT GATCAAAGAT GGAAATGCCA ATGATATCAA AACTTTAGTT
GCAGAAGCAA AGGCGATGCG GGCTTACTAT TATTCTGTAC TGGTAGTACA GTTTGGTAAT
ATCCCGCTGA TCACAACAAC TGATGATCCC GTAAAAAATT TAAATCCTAC CAGAAGTACT
GTTGCCGAAA TTTATGCCCA GATTGTGGCA GATTTAACTG CGGCAGCACA AGATCTTCCT
GTAGTACCTT ATCAGGGCAA TCTTCAGCGT GTGACCAAAA AAGGAGCGCT GGGTTTGCTG
GCCCGTGTAT ATGCACAAGG AGGGGGAGAA GGATTAATGG AGGGAACCAA AAGTTACTGG
CTTAGGGCAA AAGAAGTTGC TGAGGATCTG ATTTTAAATA AAGGGGCCTA CGGTGCTACT
TTGTATACAG ATTTTGCCCA GGTATTTGCT TATGCCAACA ATAGAAATAA TGCGGAAGCC
TTATTTACTG CGTATGGCCT GAATCCTTAT AGTCCATCGT ATGATGTGGC AACATCAAAT
TCAAAACCCA ACTGGTACCT GCACTTTTAT CCATCACTTG ATAATGCATT TGGCGCAGGT
ACAGACCTTT TAAAAAGAGG TGTAGGTTCT AATACGTCAA ACGCATATTA TGGACGCCTG
AACCAATCGT TTATTGCGCC TACAAAATAC CTGATCAATT GTTTTAATGC GACCTATGAT
AAGCGTTGGG AAAATTCATT TCAGACAGCG TTTGCAAACT ATTCGGGGGT ACAGGCAAAA
ACAACTAATC CGACCCCACC AAGTCCTGCA AATGTAACCT ACGCTGATGC TACAGTTACG
CTGACAGCTG CCATATGTAC CAAATATGGT ATTAATCCTG CATTTGTTGG TCAAAAGATT
TATCCTTTTG TAGATGTAGA TGCTAAAAAT GCTTCTGCGA ATGCAACCTG GCAATATCCG
CCAAAAGTTT GGCCAAAAGG AGTAACTACC GGTGCTATTA CTTCTTTGCA AACCGTTGCA
AATGCCAATG TGCACCCCTA TCCGCTGGAT GTTGATGAAG ACAGGTTTTT CGCCTATTTA
AGTAAAGATC CGCTAACGCC AGCAGAAAAA GCACTGCGCA AATATGCAGT GGTGAATATC
AATGATCTTT TTGATCCGGC AGATCCGACA GGGGCTAAAT ACAAAGACCC TACAGGTAAT
GGTTTAACGC CGATAAATAT GGCAAATCTT TTCCCGGCTT TAAGTAAGTT TAATCATAAT
TTTGATGGTG GATGGCTAGG GGGTAACTTT CAGCAAAAAC TAGGTAATAT TATGGTGATG
CGTATGGCAG AAGTTTACTT GCTTGCAGCT GAGGCTACGC TTAAATCTGG TGGAAGCGGG
GCAGTTGCTG CCGGATATTT AAATGAGTTG CGCAAACGTG CATGCCGCAA TGCTGCCGAC
TTTAATACAG GTACCGGAAT GCAGTTAACC AATGCGACAA TGAACGATGT TTTTGATGAA
TATGCACGTG AATTATGTGG TGAGTTTACC CGTTGGGCAC TTTTAAAACG TCATAGAGCA
TTCGAGGCGC GCCTGGCACA ATATAACGGT AGGGCTGCAG CCAGCTTTAT TCCAGCAAAG
CATTATAACA GGCCTATTCC TTTCTCTTTC CTGAATACCA TCAATAATGG AAGCGAATTT
GGGACCAATG GTTACTAG
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| Protein sequence | MKNQFIKKAF SACGLGLALL LTTPSCKLDE YNPNALAEED VLRDFNGFRS FQSNIYTGLW
GSLIGMPYGF LSETGTDLWT SPTNGVSNRQ VMRYEEFTNN FNLVTNTWDF AWGSIKDCNK
TIEIAPLIKD GNANDIKTLV AEAKAMRAYY YSVLVVQFGN IPLITTTDDP VKNLNPTRST
VAEIYAQIVA DLTAAAQDLP VVPYQGNLQR VTKKGALGLL ARVYAQGGGE GLMEGTKSYW
LRAKEVAEDL ILNKGAYGAT LYTDFAQVFA YANNRNNAEA LFTAYGLNPY SPSYDVATSN
SKPNWYLHFY PSLDNAFGAG TDLLKRGVGS NTSNAYYGRL NQSFIAPTKY LINCFNATYD
KRWENSFQTA FANYSGVQAK TTNPTPPSPA NVTYADATVT LTAAICTKYG INPAFVGQKI
YPFVDVDAKN ASANATWQYP PKVWPKGVTT GAITSLQTVA NANVHPYPLD VDEDRFFAYL
SKDPLTPAEK ALRKYAVVNI NDLFDPADPT GAKYKDPTGN GLTPINMANL FPALSKFNHN
FDGGWLGGNF QQKLGNIMVM RMAEVYLLAA EATLKSGGSG AVAAGYLNEL RKRACRNAAD
FNTGTGMQLT NATMNDVFDE YARELCGEFT RWALLKRHRA FEARLAQYNG RAAASFIPAK
HYNRPIPFSF LNTINNGSEF GTNGY
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