Gene Phep_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1233 
Symbol 
ID8252331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1451812 
End bp1452924 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content43% 
IMG OID644934886 
Productprotein of unknown function UPF0118 
Protein accessionYP_003091511 
Protein GI255531139 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0667714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAG TTTCCCTACC CTTTTACACC AAACTGGCTA TGGTGTTGTT CTCCATCATA 
AGTGCAGGTT ACCTGGCCAT TTTAGGACAA ACCATCCTGG CGCCACTGCT TACTTCATTT
TTACTGGCCC TGCTCTTGTT ACCGATGGCC AATTTTATGG AACAAAAATG GCGCTTTAAA
AGGAGCATTG CAGCCATCAT ATCAGTGGTA CTGATGATTG GGGTAATCTC TTCCATCCTG
TACTTCCTGG CCAACCAGCT GACCGATTTG TGGAAAGACT GGCCCTTGCT TAAGCACCAG
GCCGAAACCT CGTTCCATGA TGTGCAACAC TGGATTTCCA GAACATTTGG CGTAAATGCA
CAGAAACAGA TAGATTACCT TAAGAATAGT GCCAGCAGCG CTGTAGCCAC CAGTGCAACG
GTGCTGGGCG CTACGTTGCT TACCGTATCC TCTACCCTTT TGTTCTTATC TTTCCTTCTG
TTGTTCACTT TTTTTATACT CAACTACAGG GGCATTCTGT TTAACTTCCT GAGTTCTGTG
TTCGAGGAAA AACATAAACA AAAAGTAAGC GAAATTGTAA GACAGATCCA GTACATCATA
AAAAAATACA TCACAGGGCT TTTTTTACAA ATGTTTATCG TTACCGTATT GATGATATTT
ACCCTGTGGG TATTGAACGT AAAATATGCC GTTTTGCTGG GCCTGATTTC GGGGATTTTT
AACATTGTAC CTTACCTGGG CATATTTACC GCATTACTGA TCAGTGTGCT GATCACTTTT
GCGACTGCCG GAGCGGCCAA GGTATTGCTG GTTTTAATTG CTTTTGTAAG CATCCATGCA
CTTGATGGAA ATGTGCTGAT GCCATTGGTA GTGGGCTCTA AAGTAAAGAT CAATGCACTG
TTTGCTTTCA TCGGCATTGT AGTGGGCGAA ATGATCTGGG GTATATCTGG TATGTTTTTA
TGTATCCCCT ACCTGGCCAT GCTTAAAATT ATTTTTGATA AGGTAGAGCA GCTTAGGCCC
TGGGGAATTT TACTGGGTGG GGAAGAGAAG CCGCAAAAGA AACGAAGGGT ATACCGCATT
ACCAAAAAGA TCAAACTGGA AGAAAAAGAA TAA
 
Protein sequence
MTQVSLPFYT KLAMVLFSII SAGYLAILGQ TILAPLLTSF LLALLLLPMA NFMEQKWRFK 
RSIAAIISVV LMIGVISSIL YFLANQLTDL WKDWPLLKHQ AETSFHDVQH WISRTFGVNA
QKQIDYLKNS ASSAVATSAT VLGATLLTVS STLLFLSFLL LFTFFILNYR GILFNFLSSV
FEEKHKQKVS EIVRQIQYII KKYITGLFLQ MFIVTVLMIF TLWVLNVKYA VLLGLISGIF
NIVPYLGIFT ALLISVLITF ATAGAAKVLL VLIAFVSIHA LDGNVLMPLV VGSKVKINAL
FAFIGIVVGE MIWGISGMFL CIPYLAMLKI IFDKVEQLRP WGILLGGEEK PQKKRRVYRI
TKKIKLEEKE