Gene Phep_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1214 
Symbol 
ID8252312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1435192 
End bp1435530 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content48% 
IMG OID644934869 
ProductYCII-related 
Protein accessionYP_003091494 
Protein GI255531122 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.742931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATT TCGTATTCAT ATTTCGCCAG GCCGATTCGG GACAAAACAG TGTTTCAGCC 
GAAGAGGCGG ACACCATTAA CAAGAAATGG AACGACTGGA TAGGCGGGAT AGCTGCACAG
GGAAAATTAA AAAATCACGG CGCCCATCTG GACCCGGCTG GTAAAGTACT TAAACCAGGT
GGCGTAGTTA CCGATGGCCC TTTCGTTGAG ATCAGGGAAA GATTAGGTGG TTTTATTGTG
GTTACAGCCG ACAATTTTGA TGAGGCAACT ACATTGGCGC ATGGCTGTCC GGCCCTGGAG
GCGGATGGCA GCGTTGAAAT AAGGCCTATT TTTGCTTAA
 
Protein sequence
MKDFVFIFRQ ADSGQNSVSA EEADTINKKW NDWIGGIAAQ GKLKNHGAHL DPAGKVLKPG 
GVVTDGPFVE IRERLGGFIV VTADNFDEAT TLAHGCPALE ADGSVEIRPI FA