Gene Phep_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1194 
Symbol 
ID8252292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1416143 
End bp1416769 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content39% 
IMG OID644934849 
ProductTetratricopeptide domain protein 
Protein accessionYP_003091474 
Protein GI255531102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATT TCAAGCAAAC AATCTTATTG TTATTTGTTT TTTCTGCAGG TACCACTTTA 
GCGCAAAACA GCGGATACGA CAAACTGGGT ATGCAGGCAA TGATGAAGGG CGATTATAAG
GTAGCCGTTA ACCAGCTGGA GAAAGCGGAT GCGAAAAGCC CAAACAATGC AGCTGTGCTG
AAAATGTTGG GATATTCTTA TTTTCAATGT GGGGATTTTG AAAACTCTAT TAAAACCTAT
AGCAATCTGA TTACGCTGAA ACCTTCGGAT TACTCTGCTT ATTATTACAG GGGCAAGGCC
AGACAAAATG TAGCCAACGA TCCTAAGGAA TCTTTAAATA ACTTAAGAGA GAACTTTTAT
CTGGCGGCAA TTAAAGATTT TGGCAAAGCC ATAGAGATCA ATGGGGAAGA AGATCCTCAA
TTGCTCCAGA ACAGGGCATT GGCCTACAAG GACTACGCCA TCTACAAATC GTATAAGATT
AAAACAAAAG CCGAAAAAGC GGCCTGTATT GCCCTTTTTA ACAATTCTAT TGCCGATTTT
CAAAAGGTTT TATTGGTTCA GCCGCAAAGA AAGGACATAC TTTCTTTAAT CGATTATGTA
AAAGCCCAGG TGGCCAGTTT AAAATAG
 
Protein sequence
MNYFKQTILL LFVFSAGTTL AQNSGYDKLG MQAMMKGDYK VAVNQLEKAD AKSPNNAAVL 
KMLGYSYFQC GDFENSIKTY SNLITLKPSD YSAYYYRGKA RQNVANDPKE SLNNLRENFY
LAAIKDFGKA IEINGEEDPQ LLQNRALAYK DYAIYKSYKI KTKAEKAACI ALFNNSIADF
QKVLLVQPQR KDILSLIDYV KAQVASLK