| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1191 |
|---|
| Symbol | |
|---|
| ID | 8252289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1412043 |
|---|
| End bp | 1412453 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644934846 |
|---|
| Product | Class I peptide chain release factor |
|---|
| Protein accession | YP_003091471 |
|---|
| Protein GI | 255531099 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACCCG TTAAAGAAGA TATACTCAAG GCTGTTACAT TCAAAACTTC GCGTAGTGGA
GGAAAGGGTG GGCAAAACGT GAATAAAGTT TCCAGTAAGG TTGAGCTGAT ATTTAACATT
GCCGAAGCCC CCTTTTTTAA TGAGGATGAA AAGGCTTTGT TAAGCCAAAG ACTGGCCGGG
CGTCTGGATC AGGAGGGTAA CCTGCATGTG GTGTCACAGG AAGACCGTAG TCAGCTGCTC
AATAAGGAAA AAACAATTGC CAAGCTGATT GTTCTTTTAA AATCGGCACT GCATGTTCAG
AAAAAGCGAA AGCCTACTAA AATACCCAGG GCTGTAATCA GGAAAAGGCT GGCAGACAAA
CAAGTTGTTG CTGAAAAAAA AGCCTCCCGA AAACGTCCCG CTATGGAGTA G
|
|---|
| Protein sequence | MIPVKEDILK AVTFKTSRSG GKGGQNVNKV SSKVELIFNI AEAPFFNEDE KALLSQRLAG
RLDQEGNLHV VSQEDRSQLL NKEKTIAKLI VLLKSALHVQ KKRKPTKIPR AVIRKRLADK
QVVAEKKASR KRPAME
|
|---|
| |