| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1159 |
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| Symbol | |
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| ID | 8252253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1361764 |
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| End bp | 1362828 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934810 |
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| Product | pectate lyase |
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| Protein accession | YP_003091439 |
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| Protein GI | 255531067 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02474] pectate lyase, PelA/Pel-15E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAA GAATGATTAA AACAGTATTG ATCTGTTTGC TAAATGCGGG TTTCACATGT
TTAAGTGCCA GGGCACAGGT TGCCGCCAAA ACTGATCATT CAACAGATCC GGCTGCCGAA
AATATGTTGG TTTACCAGCG CAGTGTTGGC GGATGGCCAA AGGCCGTGGG TAAGGTAATA
ACAGATCAAT TATACAATAA AGTACTGTCT GATGCCGAAA AAAGCCTGAT AAGGGCTGAT
TCTATGCATA ACGATGCTAC CATCGACAAT AAAGCAACTT CGAAAGAACT CCGCTACCTG
GCTACTGCCT ATAAGCATAC ACAAAACCCG GCCTATTTGA AAGCTGTGGA AAAAGGGGTA
AACTACCTGT TAAATGCCCA GTACGACAAT GGGGGCTGGG CCCAGTACCA CCCCGACCAT
AGCCTGTACC GTGGACAGAT AACTTATAAC GACAATGCAA TGGTCAATGT ATTGAACATT
ATGCAGGACA TTGCAGAAGG GAAGAACAAT TTTGATCAGC TCCCGGCTGC TTTTCGCCCT
AAAGCCGAAA ACGCAGTTAA AAAAGGAATT TCCTGCATTT TAAAAACACA GGTAAGGGTA
AATGGCAAAC TAACGGTCTG GGCGGCTCAA TACGATGAAC ACACCTTAAA GCCCGCCAAG
GCAAGGGCAT TTGAACTTGC TTCTTTAAGT GCGATGGAAT CTGTTGGTAT TGCCGAGTTC
CTGATGCGTA TTAAAAACCC TGGTGCAGAA ATTAAAGATG CCCTGAGTGC AGCCATGGCC
TGGTTTGAAC GGTCGAAAAT AACAGATCAC GATTTTGTAT TTATTGAGGA TGCGAAACAA
CCCAAAGGTA AAGACCGTAT ATTTATTGAG AAACCCGGAT CAGTCTTATG GGCCCGTTTT
TATGACATCG ATACCAATGA ACCCATATTT GTTGGAAGGG ATAGCCTGCC AAAAAAGACC
GTTGCCGAAA TAGAACAGGA AAGGCGCATT GGTTATGCAT GGTATGGTAA CTGGGCCAGT
AATTTGCTTC AAAAGAAATA TCCAGCCTGG TTAAAATCCC TTTAA
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| Protein sequence | MSERMIKTVL ICLLNAGFTC LSARAQVAAK TDHSTDPAAE NMLVYQRSVG GWPKAVGKVI
TDQLYNKVLS DAEKSLIRAD SMHNDATIDN KATSKELRYL ATAYKHTQNP AYLKAVEKGV
NYLLNAQYDN GGWAQYHPDH SLYRGQITYN DNAMVNVLNI MQDIAEGKNN FDQLPAAFRP
KAENAVKKGI SCILKTQVRV NGKLTVWAAQ YDEHTLKPAK ARAFELASLS AMESVGIAEF
LMRIKNPGAE IKDALSAAMA WFERSKITDH DFVFIEDAKQ PKGKDRIFIE KPGSVLWARF
YDIDTNEPIF VGRDSLPKKT VAEIEQERRI GYAWYGNWAS NLLQKKYPAW LKSL
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