| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1136 |
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| Symbol | |
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| ID | 8252230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1332276 |
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| End bp | 1333214 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934787 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003091416 |
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| Protein GI | 255531044 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAA TAGATTTTAT AAAAAACAGT TTGGCGGCAG CAGGAGCAAT TGTTGCAGGT
TCTGCTATAC CAGCAATCGC AGCGGATAAG ACTGCTTTGC ATAGCAGCAG ATGGTCTGCT
GGTAAAATTT TTAACCTGGA TTATGCGCCA CATCAGGGGA TGTTTAAGCA GCATGCCGGA
GACAACTTTC TGGATCAGAT CAGGTTTATG CACGACCAGG GTTTCCGTTC TATAGAAGAC
AATGGTTATT TGAAAAGAAC TATTGAAGAA CAAACAAAAA TAGGTGAGTT ACTGGCCAAG
CTGGGCATGA GAATGGGTGT ATTTGTGGTA GATGGTGGTG ACAACTGGAA AATATCACTA
ACCACTGGAA AAAAAGAATT TAAAGACAAA TTCATAGAGA CCTGCAAGCT TTCTATTGAA
GCTGCTAAAA GATGTAATGC GAAATGGTTA ACCGTAGTAC CGGGCTTTTA TGAACGAAAG
CTGCCTTATG GCAACCAGTT TGCAAATGTG GTAGATGCGA TGCGGGCAGG GGCTGAGCTA
TTTGAACCTC ATGGCCTGAT CATGGTGTTG GAAACGCTAA GTGATACACC GGAATTATTT
TTGCAACAAA CACATGAAAC TTATGCGGTT TGTAAAGCTG TTAAAAGTCC GTCCTGTAAA
ATTCTATACG ACATTTATCA CATGCAGAAA ATGGAAGGAC AGCTGATGGT GAATATGGAC
CGTTGCTGGG AGGAGATTGC CTATATACAG ATAGGTGATA ATCCAGGTAG AAAAGAACCT
ACAACAGGAG AGATCAATTA TAAGAACCTG TTTAAACACA TTTATGAAAA AGGTTACAAA
GGTGTTATGG GTATGGAACA TGGCAATTCC AAACCCGGTA AGGATGGAGA GCTGCGGGTG
ATACAGGCCT ATAGGGAATG TGATGATTTT CTTTCGTAA
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| Protein sequence | MNRIDFIKNS LAAAGAIVAG SAIPAIAADK TALHSSRWSA GKIFNLDYAP HQGMFKQHAG
DNFLDQIRFM HDQGFRSIED NGYLKRTIEE QTKIGELLAK LGMRMGVFVV DGGDNWKISL
TTGKKEFKDK FIETCKLSIE AAKRCNAKWL TVVPGFYERK LPYGNQFANV VDAMRAGAEL
FEPHGLIMVL ETLSDTPELF LQQTHETYAV CKAVKSPSCK ILYDIYHMQK MEGQLMVNMD
RCWEEIAYIQ IGDNPGRKEP TTGEINYKNL FKHIYEKGYK GVMGMEHGNS KPGKDGELRV
IQAYRECDDF LS
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