| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1131 |
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| Symbol | |
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| ID | 8252225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1323008 |
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| End bp | 1325752 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644934782 |
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| Product | glycoside hydrolase family 37 |
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| Protein accession | YP_003091411 |
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| Protein GI | 255531039 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.579131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTA GTCTGGTTGT TGGAATCCTT TTGATCCCTG CAATACTTAT TGCGCAAAAA
AAGAAATCCG GAAAATTTGA TCGGTTAAAT GACACACATG ATATGCTGCT TTCTCCCTGG
GGCCCATATT CGAAAAGGTA TGCCGGGATA TCGCATATCC CTGAGTTTAA ATCTGGTATA
CGCTTTGATT TTTCTGTATT TCCAGGTCTG TACCGTTATA AGCCATCTGT ACCGCATGTA
TTGCTGCAAT CGGATTATTT TCCCTGGGAA TCTAATAACG ACTTAACTAA ATATACGTTC
AGGCACGAGC TGCTTTGGAA GGATGAGGCC TATTCGGATG TAACTTATCG TGTGATAGAT
TCTGCTACAG TTTTGGTTGC AATACGCTGC GTAAACAATA CAGCATTGCC ACAGTATATG
GACGTAAACC TGATGTCTTA TCTGGATTAT CCCGAAAATT ATCCTGTAAA CACCATGCGC
TTAAGTGGCA GTTCGATATG GAAAAATGCA GTCGGCTACC AATCTCTGGA TTTTGCGAAG
AAAGGGCTTA GAGATAACCT GGTACAAGAT GGCTGGATTG CCGGAGAGGC CAGAGCTGCT
GAATATATTG ATGGAAGGGC GATTGGGTCT ATATTTGGAA ATACAAAAGG CAATAAAGTA
ACCTATAGCA TAGCCTTAAA AAACGATCAG CTAAAAGGTC GGATAAGTGT GCTTTACAGA
ATGAAGAGTG GCAGCAGCCA GACTTTTTAT ACCGGTGGTT TAACGACTGA AGCGCTAAGG
TTAAAGGGCA CCGGGAATTT TGAGCAGATC AGCATTCCAT ATCATGCTGC CAAAGCGGGC
GCACAGTTAT TGTCATTTGA AGCTGAAGGT GGCAGTGCTG TTGAATTTAA CGGTTTTTCC
ATCATTCCTG AAAAAGAAGC ATCAGCGGAA ATTATTGCAC TGGAAAAGAA ATTCAAACCA
GCAATAACGG AGAATATTGA TGCTAAAAAT GTGATACTTA AGTACCAGGA AATTGCCGGC
TATTATGGGA TAAGCTGGGA TGATGCCCAT GGTATTGTAC GTGAATTTAG AAATGATGAA
CTGGATTATT ACTTTAAAAG GCATGTAAAC AACCATACGA CCAAAACATT TATCGGGAAC
GATAAAGGAA ATTTTGCCAA TGTTTACATC AGGCCGGTAG AGCTGGATGC CCACGAGGAG
AAAACTGTTT ATGCATTGGT ATGTACAGGG AAGTATGAAT ATGTTAAAAA ACGCCTGGGT
AATTTAAATG AGATAAAGAA CAAGGTATTG CAGGGCGACG AGAAGCCGGT TGTTGCAGAA
GTACTTCCGG AAGGAAAAAA ATATGAATTT AGCCAGAAGA TATTAAAGGC TACCCTACTA
ACCAATATCA TGTACCCGGT TTATACCGCT AATAGTTACA TCAGGCATTT TACACCGGGA
AAATGGTATA ATTCTTTGTA TACCTGGGAT TCAGGTTTTA TTGCAGTAGG TTTAAATGAG
ATCAGTACTG AACTGGCCGC TGAATGTATA AACGTTTATA CTACACCGGA AGGGAATCAG
AATGCTTTCA TTCAGCACGG TACCCCATAC CCTGTACAAG TTTATGCATT TTTTGATCTC
TGGAACAAGA CTCAGTCAAA GGAAGCCCTG GCTTATTTTT ATCCGCGCCT GAAAAAGTAT
TATGCGTTTA TGGCAGGCCG CTACGGGAGT TCCAATACAA GGCGGCTGAA ATCGAACATG
CTGACCTCCT GGGACTATTT TTACAATTCT GGCGGCTGGG ACGATTATCC CCCGCAGGTA
ACGGTGCATG AGCAAAAAGC TACCAAGACT GTTGCTGCAG TGGCCAATAA TTCCTATAGC
ATCCGTATTG CTAAAATGCT GCGGCTGGTT GCGCAGGCTT TAAAGAAAGA AAGTGACATT
GCGGAGTATG ATAAGGACAT TAAATTGTTT AGTGATGCCT TGCAGAAGTA TTCCTGGAAC
GATACGGCCG GTTATTTTAG CTATGTAGTG CATGATGAGC AAGGTAATGC AACTGGCCAT
TTTAAAGATC CACTGAGTGG TAAAGACCAC AATATGGGAT TGGATGGTGC TTATCCATTG
CTTGCCGGTA TTTGTACACC GGAACAGGAA GAAAAGCTGA TAGAAAAAAT TTTCTCACCA
CAGCACATGT GGACACCTTC CGGTATTTGC GTGGTTGACC AGTCGGCCCC TTATTTTAAA
CCCGTAGGCT ATTGGAACGG TTCCGTTTGG ATGCCCCACC AATGGTTTGT GTGGAAGGCG
ATGCTTGATC TGGGACGACC TGATCTGGCC AGAAGAATAG CGCAAAAGGC ACTGGACATT
TTTAAAAACG AAGTGGACAA TTCTTATGCT ACTTTTGAAT ATTTCTCTGC AAAAACAGGA
AGGGGCGCCG GATGGCATCA GTTTGGTGGA TTATCGGCCC CTGTGCTCTC CTGGTTCTCA
GCTTATTTTA AGCCCGGTAC AGTTACTGCA GGATTTGAAA TCTGGATAAA AGACCAAACA
TTTAATCCTG CTCAATCTGA ATACAAGGCC AACCTTTCTT TAGATCAGAC TACTTTGGCC
CGTCAAAGGA GTTTGCTTGT CTGTATGAAC CCTGCTTTCC AGTATCAGGT TACGTTAAAC
GGTAAAATTA TCAAGGCTGA ATCACCTTAT CCCGGTCTGC TTCAGATTAC TTTGCCAGCT
TCCAATAAAG ATGCCGCGCT GAGTATAATA CCCTCAAAAG AATAG
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| Protein sequence | MRISLVVGIL LIPAILIAQK KKSGKFDRLN DTHDMLLSPW GPYSKRYAGI SHIPEFKSGI
RFDFSVFPGL YRYKPSVPHV LLQSDYFPWE SNNDLTKYTF RHELLWKDEA YSDVTYRVID
SATVLVAIRC VNNTALPQYM DVNLMSYLDY PENYPVNTMR LSGSSIWKNA VGYQSLDFAK
KGLRDNLVQD GWIAGEARAA EYIDGRAIGS IFGNTKGNKV TYSIALKNDQ LKGRISVLYR
MKSGSSQTFY TGGLTTEALR LKGTGNFEQI SIPYHAAKAG AQLLSFEAEG GSAVEFNGFS
IIPEKEASAE IIALEKKFKP AITENIDAKN VILKYQEIAG YYGISWDDAH GIVREFRNDE
LDYYFKRHVN NHTTKTFIGN DKGNFANVYI RPVELDAHEE KTVYALVCTG KYEYVKKRLG
NLNEIKNKVL QGDEKPVVAE VLPEGKKYEF SQKILKATLL TNIMYPVYTA NSYIRHFTPG
KWYNSLYTWD SGFIAVGLNE ISTELAAECI NVYTTPEGNQ NAFIQHGTPY PVQVYAFFDL
WNKTQSKEAL AYFYPRLKKY YAFMAGRYGS SNTRRLKSNM LTSWDYFYNS GGWDDYPPQV
TVHEQKATKT VAAVANNSYS IRIAKMLRLV AQALKKESDI AEYDKDIKLF SDALQKYSWN
DTAGYFSYVV HDEQGNATGH FKDPLSGKDH NMGLDGAYPL LAGICTPEQE EKLIEKIFSP
QHMWTPSGIC VVDQSAPYFK PVGYWNGSVW MPHQWFVWKA MLDLGRPDLA RRIAQKALDI
FKNEVDNSYA TFEYFSAKTG RGAGWHQFGG LSAPVLSWFS AYFKPGTVTA GFEIWIKDQT
FNPAQSEYKA NLSLDQTTLA RQRSLLVCMN PAFQYQVTLN GKIIKAESPY PGLLQITLPA
SNKDAALSII PSKE
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