Gene Phep_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1096 
Symbol 
ID8252190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1278927 
End bp1279508 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content44% 
IMG OID644934747 
Producthypothetical protein 
Protein accessionYP_003091376 
Protein GI255531004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000963516 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAGGT ATAAAAATGG AATAAACGGG CCATTTAGTG GCAAAATAGG TAATGCGGTA 
GGAGTAAATT ACCGCGGTAT TGATTACATG CGCAGTTTAC CAGAGTTTAC GCAAAAACAG
CCAACAGTAA AACAACTGAA TCAGCGTGTT CTGCTGGCTA TGGTAAGTAG CTGGCTGGCA
CCTTTAAAAG CGCTGATATG GATTGGCTAT CAGGTTTTTA CCGGCAGTAA AACACCAATG
AACGGCTGTG TGTCCTTTCA TTTAAAAGAG GCGGTTACAG GTAATTCGGC CGCCGATTAT
GCCATCAACT TTGCAAAGGC CGTGTTTAGC CGCGGAGAGT TATTGATCTC TTTAATTAAT
CAGGTATTGG TGTTAATTGA TGGGATACTG CGCATTGAAT GGGACAATGC CTTGCCCTCG
GCTTTTAACA GGGATGACGA TAAGGTTAAT GTGGTTATTT ACAATCCGGC AAAGCAGAAG
TTTGTAACCT TTAAGGATGT GGCACAAAGA GGGGATAAGC AGGTGGATTT ACAGCTGCCG
GCAAACTTTA CCGGGGATAG CCTGCATGTA TGCACTATGT AA
 
Protein sequence
MARYKNGING PFSGKIGNAV GVNYRGIDYM RSLPEFTQKQ PTVKQLNQRV LLAMVSSWLA 
PLKALIWIGY QVFTGSKTPM NGCVSFHLKE AVTGNSAADY AINFAKAVFS RGELLISLIN
QVLVLIDGIL RIEWDNALPS AFNRDDDKVN VVIYNPAKQK FVTFKDVAQR GDKQVDLQLP
ANFTGDSLHV CTM