Gene Phep_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1061 
Symbol 
ID8252155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1248375 
End bp1249280 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content38% 
IMG OID644934713 
Producthypothetical protein 
Protein accessionYP_003091342 
Protein GI255530970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.978099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGAA AATTAAATAC TGACAATATG AGAAGATATC TGTTAATGGG GATGCTGACA 
ACTATAGTTT ACAGCTCATT TGCACAAACG AATACTTTTC CTACGAGCGG AAATGTTGGG
ATAGGGACGT TAACTCCTAC TGGTAACCTT GAAGTGATTG GATCCACTAA TTATAATTGG
GTCACTACAA TAGTAAATAA CGGAGTCACA AATGCACATG GGTTATACGT AAACATTAAT
TCATCCAGTA ATGGTGTCCC TTTTCGGGTA GATAAGGGCA GTAGTCCTTT ATTTGAGGTT
ACTAATAGTG GTATGGTAAA TATTAGCGGA GTGACTAGTT TGAGGAGTAG TGTGCCAACA
GATGGCTATT TAACTATAAA TCCAGGAGGG CCTACAACAC AGGGATACAT CAATTGGTGG
AAACCGGGAA ATACTAGAGT GGCATACATG GGGTATAATG ATGGATCAAG TTATAATAAT
TTGGGTTTAA CCTTGGAAGG TGCAAATTTT ATTGTAAATG GTGGCAATGT CGGCATTGGT
ACTACAGATC CAAACGGGTA TAAACTAGCC GTTAACGGAA AAATTAGAAC CCAGGAAATC
AAAGTAGAAA ATGCCAACTG GCCAGACTAT GTATTCATGA AAGATTATGA ACTTCCAACC
CTCCAACAAA CCGAGCAACA CATTAAAGAA AAAGGCCATT TGCCCGGCAT TCCTTCAGCC
GAAGAAGTAA AAGCCAATGG TATTGATTTG GGAGAAATGA ACGCGAAGCT GTTGCAGAAA
ATAGAGGAGC TGACTTTATA CTTACTCGAA CAGAATAAAC GGCTAAATGA CCAACAAAAA
ATGTTAGTCA ACCAGCAATT GGAAATTCAA GGGCTTAAAA AACAAAACAA TGAAAATCAT
AAATAA
 
Protein sequence
MLRKLNTDNM RRYLLMGMLT TIVYSSFAQT NTFPTSGNVG IGTLTPTGNL EVIGSTNYNW 
VTTIVNNGVT NAHGLYVNIN SSSNGVPFRV DKGSSPLFEV TNSGMVNISG VTSLRSSVPT
DGYLTINPGG PTTQGYINWW KPGNTRVAYM GYNDGSSYNN LGLTLEGANF IVNGGNVGIG
TTDPNGYKLA VNGKIRTQEI KVENANWPDY VFMKDYELPT LQQTEQHIKE KGHLPGIPSA
EEVKANGIDL GEMNAKLLQK IEELTLYLLE QNKRLNDQQK MLVNQQLEIQ GLKKQNNENH
K