| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1032 |
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| Symbol | |
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| ID | 8252126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1206139 |
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| End bp | 1207005 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644934685 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003091314 |
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| Protein GI | 255530942 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.755418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGG TTCAGAAATT TGGTATGAAC CAAGGCTGTC TACTTGTTCA GTCGGCCAGT
CATTACCTGG CCCATATTGA ATTGTTCGAG TATAAGCTTG AACAACAGGC AAATATTCAT
TTCTCTGTAA ATGAACCTTC TTTTTTTATG TATGCCAATC TGAATCAGAA TTCCTGCTGG
CTGTGTTACC GACCGGCCGG TAAATACCAA GAAACCATTG CTTCGGGGGC TCATCAGCTG
CTGCTGATCA CCTTCAGGCC CGACTGGCTA ATCTATAAAT GTCATAAAAT GGAAGAACTG
AAACCCTTTA CGGCATTTTA TCGCAACGCG GAAAGCGCAT ACAACAGGCT GCCATCCTTT
GATATCGCTG CAAACCTGTT CAACGCTTTA CAAAAAATGG ATGCCAAGGG CAGCGATTTA
ATAGCCGATG CAGATGGTTA TATTTTTATT AACCACTGCC TCAATAAATA TTACAGGAAG
CTTGCCGGAC AAAATCCTAC ACACAACTAT CACTTAGAGA AAGCAGCTGC CATTGCCCGT
TTTGTAAAGG AAAATTATGC CTCAGCAATG GTAGATGACC TGCCAAAGAT TGCTGATAGG
TTTATGGTTT CAGAGCGGAG CCTGGCGCGT CTGGCCAGAC TGGCTTTTGG TATTCCCTTA
CACGAGCAGG TAATCAATTT GCGCATGGCT TCGGCTTTTT CCCTGCTTTC TACTACCAAC
AAACCCATCT ATGAAATTGC TCAGCTTAAT GGTTACAATG ATCCGCATTA TTTTAGTAAG
GCCTTTAAAA AATACTATGG CATATTGCCA AAAAGTGTTG AAAAAACATC TAAAAAATTA
AGTGTTCAAG AAAAAATAAC AGGCTAA
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| Protein sequence | MAQVQKFGMN QGCLLVQSAS HYLAHIELFE YKLEQQANIH FSVNEPSFFM YANLNQNSCW
LCYRPAGKYQ ETIASGAHQL LLITFRPDWL IYKCHKMEEL KPFTAFYRNA ESAYNRLPSF
DIAANLFNAL QKMDAKGSDL IADADGYIFI NHCLNKYYRK LAGQNPTHNY HLEKAAAIAR
FVKENYASAM VDDLPKIADR FMVSERSLAR LARLAFGIPL HEQVINLRMA SAFSLLSTTN
KPIYEIAQLN GYNDPHYFSK AFKKYYGILP KSVEKTSKKL SVQEKITG
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