| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1020 |
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| Symbol | |
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| ID | 8252114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1195346 |
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| End bp | 1196350 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644934674 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003091303 |
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| Protein GI | 255530931 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTA GAAAAAAAAG AATGATGCGA AATGTATCCG CTGCAATTTT AACAGCTGGT
ATACTTTTAT GCGGGGAGGC ATTATTTGCC CAGGATAACC TGCAGATACA GAGAAAGGGG
AAGGCTAGTG TTAAGATCAG TTTAAATGCT TATTCCTTTA CAAAACCGCT TTTAGATAAA
GTACGGGGCC GTGGAGCAGG AATGTCCTTA TTTGAATTAA TGGACTGGTC GGCCAAAAAC
GGTTTTGATG CGGTAGACCT TACCGGCTAT TTTTTTCCGG GTTACCCGGC AGTACCCAGT
GATGAGTTTA TCAATGAGAT AAAAAAACAT GCTTTTAAAC TGGGGCTTGA CATCAGTGGT
ACAGGGGTAC GCAATGATTT TGCTGATCCT GATCCTGTAA AAAGGGCGGC TGACGTAAAA
CATGTAAAAG AATGGATAGA TGTGGCTGTA AAATTAGGCG CGCCTGTGAT CAGGATCTTC
GCCGGGCCAA TTCCGGCTGG TTATGAAAAT AAACGTGCTG AAATTGAAGC TTATATGGCT
GCAAGTATGA AGGAATGTGC CGATTATGGA AAATTAAGGG GCGTACTGAT TGGTGTGCAG
AACCACGGCG ATTTTCTTAA GACAGCCGAC GAAACGATCA GCCTGGTAAA ACGTGTCAAC
TCCGATTGGT TTGGTGTAAT TGTAGATTCG GGGTATTTCA TTACTGAAGA CCCCTATGTA
GATATAGAAA AAACTATGCC TTATGCCGTT AATTTTCAAT TGAAACTAAG CGCTTTTGGC
GCAGCAAGCC CTATAAAAAT AGATTTGCCA AGAATCATGA AAATTGTTGA AAAAACAGGA
TATCGCGGTT ATCTGCCTAT AGAAACACTA TCGCCTCAGG GCGGTAACAA AAACAAGAAA
AATACACCAA ACGCTGCAGA CAAGGCCGCT TATGACCCTT ATACGGTGGT GCCGGCATTT
TTAAAAGAAG TTAAGGCTGC ACAGCTGGCA CAGTTTGGAG ATTAG
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| Protein sequence | MNIRKKRMMR NVSAAILTAG ILLCGEALFA QDNLQIQRKG KASVKISLNA YSFTKPLLDK
VRGRGAGMSL FELMDWSAKN GFDAVDLTGY FFPGYPAVPS DEFINEIKKH AFKLGLDISG
TGVRNDFADP DPVKRAADVK HVKEWIDVAV KLGAPVIRIF AGPIPAGYEN KRAEIEAYMA
ASMKECADYG KLRGVLIGVQ NHGDFLKTAD ETISLVKRVN SDWFGVIVDS GYFITEDPYV
DIEKTMPYAV NFQLKLSAFG AASPIKIDLP RIMKIVEKTG YRGYLPIETL SPQGGNKNKK
NTPNAADKAA YDPYTVVPAF LKEVKAAQLA QFGD
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