| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1018 |
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| Symbol | |
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| ID | 8252112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1193437 |
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| End bp | 1194393 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934672 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003091301 |
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| Protein GI | 255530929 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.706274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTTA AAAAACTGAT CCCTGTAATG TTGCTGTTGT GCATAAGTAC ACAGTTAATG
GCCCAGAAAA CCAGAGCAGG TATTCCCGTA AAAATTGCAC TGCAAGCTTA TTCATTTAGT
AAATTACTGA ATGACAATGC CAAAGGCCGT GGTGCCGGAA TGTCTTTGCC AGATTTGCTT
GATTTTAGTG CTGAAAATAA TTTTGATGCG GTTGACCTTA CCGGCTATTT TTTTCCGGGT
TACCCCAACG TTCCTTCCGA TGAATACATC AACAACGTTA AAAGAAAAGC ATTTCAACTG
GGCCTCGACA TTTGCGGAAC AGGGGTGAAA AATGATTTCG CCAATCCGGA CCCTGAAAAA
CGGGCAGCAG ATGTAAAACA TGTTAAAGAG TGGATCGATG TGGCCGTAAA ACTGGGAGCA
CCTGTAATAC GGATCTTTTC GGGCAACATT CCAGAAGGCT ATGAAAAGCG ATGGGACGAG
ATTGCCAGAT ACATGGCTGC CAGCATTAAA GAATGTGCCG ACTATGGTAA AAAGCGAGGA
GTAATGGTAG GTGTCCAAAA TCATGGAGAT TTTTTGAAAA CAGGTGACGA AACCATCAGG
CTCGTTAAAA TGGTAAATTC CGAATGGTTT GGGGTAATTG TAGATTCAGG TTATTTTTTA
ACGGAAGACC CTTATGCCGA CATGGCAAAG GTAATGCCTT ATGCAGTTAA TTTTTTGTTA
AAGGAAAGCC CCATACCTGG TGGCAGTGAT GTACGCATTG ATCTTCCGAA AGTGATGAAG
ATCCTTAAAG ACAGTAAGTA CATCGGGTAT CTTCCCATAG AAACGCTTTC GGCTAAAGGA
CCTGGAAAGG AAGGAAATAA ATCAGCAGTA AAGAAACCGG CCTATGATCC TTATCAGGTA
GTGCCTGTTT TCCTTAAGGA GGTAAAAGCT GCAGTTAAAG AAGCTTATAA AAATTAA
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| Protein sequence | MIFKKLIPVM LLLCISTQLM AQKTRAGIPV KIALQAYSFS KLLNDNAKGR GAGMSLPDLL
DFSAENNFDA VDLTGYFFPG YPNVPSDEYI NNVKRKAFQL GLDICGTGVK NDFANPDPEK
RAADVKHVKE WIDVAVKLGA PVIRIFSGNI PEGYEKRWDE IARYMAASIK ECADYGKKRG
VMVGVQNHGD FLKTGDETIR LVKMVNSEWF GVIVDSGYFL TEDPYADMAK VMPYAVNFLL
KESPIPGGSD VRIDLPKVMK ILKDSKYIGY LPIETLSAKG PGKEGNKSAV KKPAYDPYQV
VPVFLKEVKA AVKEAYKN
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