| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1016 |
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| Symbol | |
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| ID | 8252110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1189255 |
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| End bp | 1191039 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644934670 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003091299 |
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| Protein GI | 255530927 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00288117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAG ACATGAAAAA GATTAAGAAC GTTTTTGTTG CCATTGTATC GGTAACCTGT
TTAATAAGCT GCTCAAAGGA ACGGCTGGTA GAAAGTCCGC CAAACTTTAT AACTGCCGAT
GTATTATATA CCACTGTTGA AGGTTTTGAT GCCGGCCTTA ATGGCTTATA TGCGTCGGTA
AGGGATGAAA GAAATGGATT GAATTATACC AGCGGATTTG GCACCATAGA TCTGAGGGCA
GCCATCATGA TTACCGGTAC AGATAATATT GGTGCCGGAA GTAATACCGG GGGATTGTCG
ACCATTACTG CCGACTGGAC CAAAAATACG CCGGCCGACC CCAATATTGA CAAATTGTTT
TTATGGTTGT ATAAAGTAGT GAGTGCGGCC AATACCATCA TTACCAGAGC AGAAAATCCG
GTGATAAAAT GGGGTGCCGG TAATAAAGAA AGGGTATTGG GCGAAGCCAG GACGGTAAGG
GCCTGGGCAT ACCGTCACCT TACCTACTTA TGGGGCGATG TACCTTTATT AACGGAAGAG
GTATCAGGCG AGAATATCAG AACAGACCTT GTACGTGAAA AAGTAGCTAC CATCAGAAGG
GTGATGATTG AAGATTTTAA ATATGGAGCC GAAAACCTTC CCTGGTCGCC CACCAAAGCA
GGCCGCTTAA CCAGGGGAGT GGCGCAAACC TACCTTTCAG AAATCTACCT TGCTGTGGGA
AAACCGGATT CTGCATTGTT CTGGGCAAAT GAATGTATCA CCAAAGGACC TTATAGTTTG
GTTAAGACCA GGTATGGTGC TGGTTCCGAC CAGCCTGGTG TAGCTTTTAT GGATATGTTC
AATCCGGGCA AAACAAATAT TTCAGATGGA AATACGGAAG CCCTTTGGGT AATGCAGTGG
GAAAGGAACG CGATTGGGGG AGGTGAGAAC CTGATGCGCC ATGAAACAAC AATGAGGTAT
CCGAATGCGA GGTATGTGAA CCGTGTAGGT TTTCTTACGG CAACAGATGC CCGCGGTGGC
CGGGGCTGGA GCCGTCAGAC CATTACCAAA CAGGCTTTAT TGTGGTACAC CGCTTCGAGT
GACGTTCCGG CAGGTAAGGT TGACCAGAGA AGTTCTGAAT TTGCACTGCG TAAATATTTT
ATCCTGGGGG CCGATGATAA TTTTGCAGGT CTGACCAATA CGGCGACCAA AGCACCATGG
AAATTAGGGG ATACCGTATG GCTGGCAACC GGGATATCAA GAAGTATAAT TGCTGATCCT
GGTATGAAAT CTAAAAGTGG TGCGGTTAAT TTTTCCTTAC TGCCGGATGG TACTGCCAAT
AACAACGACT GGCCATACAG TTTGAAATTT GCTTATAATG ATGCCGGCTT TGCCAATACA
ACAGAGTCTC ACCAGGACCA GATCTATATG CGTCTGGCAG AGACCATTTT GTTAAGGGCA
GAGGCTAAAG GCCGTTTGGG TAACTTACCT GGAGCTGCAG ATGACATTAA CCTGCTGCGT
GACCGTGCGA ATGCCAAACG GGTTATTGTG TCCAACTTTG GTGCAACATT AACTACTTTC
CTGGATTATA TCCTGGACGA GCGCTCCCGG GAATTGCTGG TGGAAGAACA CCGCAGGTAT
ACCTTATTGC GTATGGGTGG GGCCAGTTTT TTCTACAGGA GAACCAATAC CTTCAATACC
ATCAGTAAAA ACCTTGCACT AAGGGATACA TTGTTGCCTA TTCCGCAATC GGTAATTGAT
GCAAACCTGA CTTTAAAAAT GCCTCAAAAT CCTGGATTTA ACTAA
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| Protein sequence | MLKDMKKIKN VFVAIVSVTC LISCSKERLV ESPPNFITAD VLYTTVEGFD AGLNGLYASV
RDERNGLNYT SGFGTIDLRA AIMITGTDNI GAGSNTGGLS TITADWTKNT PADPNIDKLF
LWLYKVVSAA NTIITRAENP VIKWGAGNKE RVLGEARTVR AWAYRHLTYL WGDVPLLTEE
VSGENIRTDL VREKVATIRR VMIEDFKYGA ENLPWSPTKA GRLTRGVAQT YLSEIYLAVG
KPDSALFWAN ECITKGPYSL VKTRYGAGSD QPGVAFMDMF NPGKTNISDG NTEALWVMQW
ERNAIGGGEN LMRHETTMRY PNARYVNRVG FLTATDARGG RGWSRQTITK QALLWYTASS
DVPAGKVDQR SSEFALRKYF ILGADDNFAG LTNTATKAPW KLGDTVWLAT GISRSIIADP
GMKSKSGAVN FSLLPDGTAN NNDWPYSLKF AYNDAGFANT TESHQDQIYM RLAETILLRA
EAKGRLGNLP GAADDINLLR DRANAKRVIV SNFGATLTTF LDYILDERSR ELLVEEHRRY
TLLRMGGASF FYRRTNTFNT ISKNLALRDT LLPIPQSVID ANLTLKMPQN PGFN
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