| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1011 |
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| Symbol | |
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| ID | 8252105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1182331 |
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| End bp | 1183638 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934665 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003091294 |
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| Protein GI | 255530922 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGTAA ACAAGGTACT GGAACGGTTA AAGATTGACA GGCTGAATCA AATGCAGCTG
GAAACCCTGG CTGCAAGTAA AAAAGGGCAA GATGTACTGT TGCTTGCGCC TACAGGATCT
GGTAAAACCC TAGGCTTTTT ACTGCCCTTG TTAAATAATT TAGACCCAGC TATAGTAGGT
GTACAGGCTT TAGTGCTTGT GCCTTCCCGT GAACTGGCTT TGCAGATAGA AATGGTATTC
AGGCAAATGG GTACAGGCTT TAAAGTAAAC TGCTGCTATG GTGGCCATCC TGTTAAAACA
GAGCGGAACA ATTTTGAACA GCCCCCTGCC GTACTTATTG GTACACCTGG AAGGATTGCC
TATCATCTCC GTCACGAGAA TTTTGACGAA TCCGGAATTA CAACACTGGT TTTGGATGAA
TTTGATAAGG CCCTGGAGTT TGGCTTTCAG GAGGACATGT CCTATATCAT ACGGAAATTA
CTTTCCTTAA AACAACGTTT ATTGACCTCG GCAACTTCGA TGGAGGAAAT ACCAGGTTTT
ACCGGGATTG ATCAGCCTGT TGAGGTCAAT TTTTTAAAGG ATGTTGCAGC AGCACCCGAT
CTGGAGCTGA AAAAGGTAAA TACTACAGCT GCCGATAAAC TGGATACCCT GTTAAGGCTG
ATCTGTAAGA TCGGTGATAA AAGAACATTG ATCTTTTGTA ACCACAGAGA AACGGTAGAC
CGGATCAGCG ACCTGCTGAT CGATCAGGAT CTGGCACACG ATATTTTTCA TGGTGGTATG
GAGCAGGATG AGCGGGAACG TGCATTACTG AAATTCAGGA ATGGGAGCAT TAAAATCCTG
ATCACTACAG ATCTGGCTTC ACGGGGGTTA GATATTCCCG AAGTAGAATG TATCATCCAT
TACCAGCTGC CTTATACAGA GGATGCATTT TTGCACCGTA ATGGGCGTAC AGCCCGTATG
AATGCAAAGG GAACGGCTTA CCTGGTCATA GCAGAGGACG AAAAATATCC TTTTCTGAAA
ACTGACATCA AAACAGAGGA ACTCAAAGGT AATTTTCAGC TTCCTAAAGA CAGTGAGTGG
CAAACCCTTT ATATTGCTGC AGGCAAAAAA GATAAGGTGA ACAAGATAGA TATTGTTGGC
CTGTTGCTAA AAAAAGGGGG GCTGCAGAAG GACGAGGTGG GTTTGATAGA GGTGAAAGAC
CAGGTATCTT ATGTTGCTGT AAAACGCAGT CTGGTTAACC CTGTGTTAAG GGCGCTGGCA
AACGAAAAAA TAAAGAATAA AAAGGTAAAG ATTGAAATAG CAATGTAA
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| Protein sequence | MMVNKVLERL KIDRLNQMQL ETLAASKKGQ DVLLLAPTGS GKTLGFLLPL LNNLDPAIVG
VQALVLVPSR ELALQIEMVF RQMGTGFKVN CCYGGHPVKT ERNNFEQPPA VLIGTPGRIA
YHLRHENFDE SGITTLVLDE FDKALEFGFQ EDMSYIIRKL LSLKQRLLTS ATSMEEIPGF
TGIDQPVEVN FLKDVAAAPD LELKKVNTTA ADKLDTLLRL ICKIGDKRTL IFCNHRETVD
RISDLLIDQD LAHDIFHGGM EQDERERALL KFRNGSIKIL ITTDLASRGL DIPEVECIIH
YQLPYTEDAF LHRNGRTARM NAKGTAYLVI AEDEKYPFLK TDIKTEELKG NFQLPKDSEW
QTLYIAAGKK DKVNKIDIVG LLLKKGGLQK DEVGLIEVKD QVSYVAVKRS LVNPVLRALA
NEKIKNKKVK IEIAM
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