Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0993 |
Symbol | guaA |
ID | 8252087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1159862 |
End bp | 1161388 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644934647 |
Product | GMP synthase |
Protein accession | YP_003091276 |
Protein GI | 255530904 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0519] GMP synthase, PP-ATPase domain/subunit |
TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit [TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.519664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTAGAAA AAATCATAAT TCTCGATTTT GGTTCCCAAT ATACACAGTT AATTGCCCGT AGGGTGCGTG AGTTAAACGT TTATTGTGAA ATTCACCCAT TTAACAACAT TCCTGAAATC GGTTCAGACG TTAAAGGTAT CATCCTGTCA GGTAGCCCAT ATTCTGTCCG TCAGAAAGAC GCCCCACAGG TAGATCTTAA CAAATTTGAC AAACATCCTA TGCTGGCGGT TTGTTATGGT GCACAATACA TCGCACAACA TGCAGGCGGT GAAGTACAAG CCTCTTCTAC ACGTGAATAT GGCAGGGCCC ACCTGAATTT CGTTGCCGAA GGCAATAAAT TATTTAAAAA TATTACTGCA GGTTCGCAGG TATGGATGTC ACATGGCGAT ACCATTACGA AAGTACCTGC AAACTTTGAA CTGATAGCCA GTACAGATAG TGTAAAAGTT GCAGCTTACC AGGTTAAAGA CACACAAACT TATGCCATAC AGTTTCACCC TGAGGTTACA CATAGCACCG ATGGTAGACA ATTGCTGGAG AATTTTCTTG TCGGCATTTG CGGATGTAAG CAGGAGTGGA CGCCCGATGC TTTTGTAGAA ACCACCATTG CTGATTTAAA AGAAAAACTG GGCAATGATA AAGTGGTACT GGCCCTTTCA GGAGGGGTAG ACTCGAGTGT AGCTGCTATC TTATTGCATA AGGCCATAGG TAAAAACCTG CACTGTATAT TTGTAGACAA TGGCTTGTTA AGAAAAGATG AGTATGCTGC CGTACTGGAA CAATATAAAC ACCTTGGTTT GAACATCAAA GGTGTAGATG CAAAAGATCG TTTCTTGAGC CAGCTTGCCG GAGTTTCTGA TCCTGAGTTG AAACGTAAAG CCATTGGAAG GGTGTTTATT GAAGTGTTTG ATGATGAAGC GCACCAGGTA CAGGATGTGA AGTGGCTGGC ACAGGGTACC ATATATCCTG ATATCATAGA ATCCGTTTCT GTAAAAGGAC CTTCAGCTAC CATTAAATCG CACCATAACG TAGGTGGTTT GCCCGATTTC ATGAAACTTA AAGTTGTGGA GCCCCTGAAT ACTTTGTTTA AGGACGAGGT GAGAAGGGTG GGGACTTCTT TGGGACTGGA GCACTTTATC ATCGGACGTC ACCCTTTTCC GGGACCTGGA TTAGCGATAA GGATACTGGG CGAGGTTACT GCTGAAAAAG TAGCCATTCT TCAGGAAGCA GATGCCATTT ATATCAATAA CTTAAAAGAA GCAGGTTTAT ACGATAAGGT ATGGCAGGCC GGAGCCATTT TCCTGCCGGT TCAATCGGTA GGGGTAATGG GAGATGAGCG TACTTACGAA AATGCAATAG CCCTTCGTGC TGTTGAATCT GTTGATGGCA TGACTGCCGA CTGGTGTCAT CTGCCTTATA ACGTACTCGC AAAAATTTCT AATGAAATAA TTAACAAAGT AAAAGGAATT AACCGCGTTG TATATGACAT TAGCTCAAAA CCACCAGCTA CTATTGAGTG GGAATAA
|
Protein sequence | MLEKIIILDF GSQYTQLIAR RVRELNVYCE IHPFNNIPEI GSDVKGIILS GSPYSVRQKD APQVDLNKFD KHPMLAVCYG AQYIAQHAGG EVQASSTREY GRAHLNFVAE GNKLFKNITA GSQVWMSHGD TITKVPANFE LIASTDSVKV AAYQVKDTQT YAIQFHPEVT HSTDGRQLLE NFLVGICGCK QEWTPDAFVE TTIADLKEKL GNDKVVLALS GGVDSSVAAI LLHKAIGKNL HCIFVDNGLL RKDEYAAVLE QYKHLGLNIK GVDAKDRFLS QLAGVSDPEL KRKAIGRVFI EVFDDEAHQV QDVKWLAQGT IYPDIIESVS VKGPSATIKS HHNVGGLPDF MKLKVVEPLN TLFKDEVRRV GTSLGLEHFI IGRHPFPGPG LAIRILGEVT AEKVAILQEA DAIYINNLKE AGLYDKVWQA GAIFLPVQSV GVMGDERTYE NAIALRAVES VDGMTADWCH LPYNVLAKIS NEIINKVKGI NRVVYDISSK PPATIEWE
|
| |