Gene Phep_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0993 
SymbolguaA 
ID8252087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1159862 
End bp1161388 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content43% 
IMG OID644934647 
ProductGMP synthase 
Protein accessionYP_003091276 
Protein GI255530904 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.519664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGAAA AAATCATAAT TCTCGATTTT GGTTCCCAAT ATACACAGTT AATTGCCCGT 
AGGGTGCGTG AGTTAAACGT TTATTGTGAA ATTCACCCAT TTAACAACAT TCCTGAAATC
GGTTCAGACG TTAAAGGTAT CATCCTGTCA GGTAGCCCAT ATTCTGTCCG TCAGAAAGAC
GCCCCACAGG TAGATCTTAA CAAATTTGAC AAACATCCTA TGCTGGCGGT TTGTTATGGT
GCACAATACA TCGCACAACA TGCAGGCGGT GAAGTACAAG CCTCTTCTAC ACGTGAATAT
GGCAGGGCCC ACCTGAATTT CGTTGCCGAA GGCAATAAAT TATTTAAAAA TATTACTGCA
GGTTCGCAGG TATGGATGTC ACATGGCGAT ACCATTACGA AAGTACCTGC AAACTTTGAA
CTGATAGCCA GTACAGATAG TGTAAAAGTT GCAGCTTACC AGGTTAAAGA CACACAAACT
TATGCCATAC AGTTTCACCC TGAGGTTACA CATAGCACCG ATGGTAGACA ATTGCTGGAG
AATTTTCTTG TCGGCATTTG CGGATGTAAG CAGGAGTGGA CGCCCGATGC TTTTGTAGAA
ACCACCATTG CTGATTTAAA AGAAAAACTG GGCAATGATA AAGTGGTACT GGCCCTTTCA
GGAGGGGTAG ACTCGAGTGT AGCTGCTATC TTATTGCATA AGGCCATAGG TAAAAACCTG
CACTGTATAT TTGTAGACAA TGGCTTGTTA AGAAAAGATG AGTATGCTGC CGTACTGGAA
CAATATAAAC ACCTTGGTTT GAACATCAAA GGTGTAGATG CAAAAGATCG TTTCTTGAGC
CAGCTTGCCG GAGTTTCTGA TCCTGAGTTG AAACGTAAAG CCATTGGAAG GGTGTTTATT
GAAGTGTTTG ATGATGAAGC GCACCAGGTA CAGGATGTGA AGTGGCTGGC ACAGGGTACC
ATATATCCTG ATATCATAGA ATCCGTTTCT GTAAAAGGAC CTTCAGCTAC CATTAAATCG
CACCATAACG TAGGTGGTTT GCCCGATTTC ATGAAACTTA AAGTTGTGGA GCCCCTGAAT
ACTTTGTTTA AGGACGAGGT GAGAAGGGTG GGGACTTCTT TGGGACTGGA GCACTTTATC
ATCGGACGTC ACCCTTTTCC GGGACCTGGA TTAGCGATAA GGATACTGGG CGAGGTTACT
GCTGAAAAAG TAGCCATTCT TCAGGAAGCA GATGCCATTT ATATCAATAA CTTAAAAGAA
GCAGGTTTAT ACGATAAGGT ATGGCAGGCC GGAGCCATTT TCCTGCCGGT TCAATCGGTA
GGGGTAATGG GAGATGAGCG TACTTACGAA AATGCAATAG CCCTTCGTGC TGTTGAATCT
GTTGATGGCA TGACTGCCGA CTGGTGTCAT CTGCCTTATA ACGTACTCGC AAAAATTTCT
AATGAAATAA TTAACAAAGT AAAAGGAATT AACCGCGTTG TATATGACAT TAGCTCAAAA
CCACCAGCTA CTATTGAGTG GGAATAA
 
Protein sequence
MLEKIIILDF GSQYTQLIAR RVRELNVYCE IHPFNNIPEI GSDVKGIILS GSPYSVRQKD 
APQVDLNKFD KHPMLAVCYG AQYIAQHAGG EVQASSTREY GRAHLNFVAE GNKLFKNITA
GSQVWMSHGD TITKVPANFE LIASTDSVKV AAYQVKDTQT YAIQFHPEVT HSTDGRQLLE
NFLVGICGCK QEWTPDAFVE TTIADLKEKL GNDKVVLALS GGVDSSVAAI LLHKAIGKNL
HCIFVDNGLL RKDEYAAVLE QYKHLGLNIK GVDAKDRFLS QLAGVSDPEL KRKAIGRVFI
EVFDDEAHQV QDVKWLAQGT IYPDIIESVS VKGPSATIKS HHNVGGLPDF MKLKVVEPLN
TLFKDEVRRV GTSLGLEHFI IGRHPFPGPG LAIRILGEVT AEKVAILQEA DAIYINNLKE
AGLYDKVWQA GAIFLPVQSV GVMGDERTYE NAIALRAVES VDGMTADWCH LPYNVLAKIS
NEIINKVKGI NRVVYDISSK PPATIEWE