Gene Phep_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0955 
Symbol 
ID8252049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1114029 
End bp1115180 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content41% 
IMG OID644934610 
ProductFecR protein 
Protein accessionYP_003091239 
Protein GI255530867 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.531637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG ATAGACTGAA ATATCTATTA GAAAATTATG TGGATGGGGG GTTATCCGGG 
CCGGAGCTGA CTGAACTGGA AGCGTGGTAT CATCAGCTTA ATTATGGTGA GCAGAAACTG
GACCAGTACA TCATGGAAGC TGGCGGGCAG GAAGTGATTA TAAACCGGAT GGAAGAAAGC
TTTAAACAAA GAATCCGTAA ACCGGTAAAC ATTAAATCTA TTTCAGTAAG AAAAATGATT
GCTGTGGCGG CCGCTATACT TTTGATGCTG TCTGCAGGCT TATATTTTTA TCAATCCCGT
TCTGCTAATC CGGCAAACAG GATTTTAGTG GATATGGAAG CTGCGGTAAT TAAACCAGGA
GGTAACAAAG CGGTACTTAC ACTGGCAAAT GGAAAACAAA TTAACCTGGA GACTGCTTCG
GATGGACAAC TGGCAGAAAC AGGTGGTGTA GAAATTGAAA AGTCGGCTGA CGGACAAGTG
TTTTATAAAG CCATTTCCGG CACAAATCAC AACGGGGAAA GCAATACCAT CAGTACACCT
AACGGTGGGC AATACCAGAT CATTTTAGCA GATGGCACGA GGGTTTGGTT AAACGCCGCA
TCAAGTTTAA AATATCCAAC TGTATTTTCG GGAAATGAAC GCAAAGTTGA GCTTATTGGA
GAGGCATATT TTGAAGTTAA AAGTAACCAG GAATCTCCGT TTCTTGTGGT GAGTAATAAG
CAAACGGTTA AAGTGCTTGG CACCCATTTT AATATCAAAG CTTATCCTGA TGAAAGTTTT
GTTAAAACCA CCTTACTTGA GGGCCGTATC ATGGTGAGTG CTGAGCGCTT CCCTGATGCT
AAAATACTTT CGCCAGGACA GCAGGCTGTA TTTGACGGGC ATCAGATAGA TATAAATAAA
GGCGATTTAA AGGAAGCTAT GGCATGGAAG AATGGATATT TTATGTTTAA AGATGAAGAT
ATTTATTCCA TAATGAACCA GGTTTCGCGC TGGTATAATG TTGAAGTGGT TTACATGGGC
AGGTTTGAGA ACAAACGGTT TGGGGGCTAT GTGTCCAGAT CGAAAAAGAT AACAGATTTA
CTGGATATTA TGGAAAGTAC AAAAGGAATC CATTTTAAAA TAGAGGGGAG GAGGGTAACC
GTGATGAGAT AA
 
Protein sequence
MEKDRLKYLL ENYVDGGLSG PELTELEAWY HQLNYGEQKL DQYIMEAGGQ EVIINRMEES 
FKQRIRKPVN IKSISVRKMI AVAAAILLML SAGLYFYQSR SANPANRILV DMEAAVIKPG
GNKAVLTLAN GKQINLETAS DGQLAETGGV EIEKSADGQV FYKAISGTNH NGESNTISTP
NGGQYQIILA DGTRVWLNAA SSLKYPTVFS GNERKVELIG EAYFEVKSNQ ESPFLVVSNK
QTVKVLGTHF NIKAYPDESF VKTTLLEGRI MVSAERFPDA KILSPGQQAV FDGHQIDINK
GDLKEAMAWK NGYFMFKDED IYSIMNQVSR WYNVEVVYMG RFENKRFGGY VSRSKKITDL
LDIMESTKGI HFKIEGRRVT VMR