| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0940 |
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| Symbol | |
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| ID | 8252034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1094721 |
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| End bp | 1095611 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644934595 |
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| Product | transcriptional regulator domain protein |
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| Protein accession | YP_003091224 |
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| Protein GI | 255530852 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000423424 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCTTA ACCGAAATCG CCTCTCCGGA AAACGCAAAT ACCTGTATGG ATTATTACTC
CTCTCGTTTA TCTCTGTAAT CTGCGTGGCT TTCAGTATGG TGGACAATGA AGATTTTGAT
ATCTCCAGAA GGGAAGTTTT GCTGCGCAGG ATCGGACATG AACTGCTCTT ACAGTCAGGT
GATAGTAAAT CAAGGGTACT TCCGATAAAA AAGATTGCTG ACAACGAATA CCTGATCAGC
TTTGAGAATG AGCTTACTTT TCTACCGGAC TCCCTGGTGA ATACCACCCG GCGTTTGCTG
GTCAAAGACC CGCTGGCACA TGATTATGTG GTCAACGTAC TGAACTGCGG CAACGCTAGT
GTAGCCTACG GATATGCTAT ATCCAAAAAT AAAAATGATG ATATTGTAGC CTGTAGAGGA
AGAGTGCAAC CGAGAGCATG TTACAGGATT AGCATTAAAT TCAAACCGAC AGGTATAAAT
GCAACAACAA AAGGTTGTAT TCTCGGTGGC CTCCCCTTGT TAGCATTTGT TGGATTTATA
TTTTTGAGTT CTGTTAAGCC GCAAAGAGCC TTACCTAATG GTCAGTATAC TGACATGTTA
ACTTTAGGCA CAGTGGGGTT CGACGCGAAG AATCGTAAGC TCATAATAAA CGGAAAAACA
ACAGACTTAA CTGGAACCGA AACCCGTGTA CTACGCATTT TTGCATTATC TCCTAACGTG
ACTATAGAGA GAAGCCGGTT ACAAAAAGAG ATATGGGAAG ATGAAGGTGT TATAGTAGGG
CGCAGTCTGG ATATGTTCAT ATCAAAACTG AGAAAAAAAC TGGAACATGA TCCGAATATC
AACATTGTTG TTATACGCGG CAAAGGATAT AAGCTTGAAA TAAGCGCTTA A
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| Protein sequence | MDLNRNRLSG KRKYLYGLLL LSFISVICVA FSMVDNEDFD ISRREVLLRR IGHELLLQSG
DSKSRVLPIK KIADNEYLIS FENELTFLPD SLVNTTRRLL VKDPLAHDYV VNVLNCGNAS
VAYGYAISKN KNDDIVACRG RVQPRACYRI SIKFKPTGIN ATTKGCILGG LPLLAFVGFI
FLSSVKPQRA LPNGQYTDML TLGTVGFDAK NRKLIINGKT TDLTGTETRV LRIFALSPNV
TIERSRLQKE IWEDEGVIVG RSLDMFISKL RKKLEHDPNI NIVVIRGKGY KLEISA
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