Gene Phep_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0936 
Symbol 
ID8252030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1090160 
End bp1091206 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content41% 
IMG OID644934591 
Productendonuclease 
Protein accessionYP_003091220 
Protein GI255530848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000112405 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTGGAGCA TTGCAATAGG GGGAGATAAG TTGTCCAGAG GGCTTACGCT TGAAGGACTA 
ACGGTGAGTT ATTTCACAAG AAGTACTTCA TTGTACGACA CGTTGATGCA GATGGGAAGG
TGGTTTGGTT ACAGGAATGG CTTTGAAGAT TTGTGCAGGA TATATACTAC CCCCGAGCTA
TTCAGATGGT ACCGTCATAT ATCAACCGCA TTTGAATCAT TGCGGGAGGA ATTTATCGAA
ATGTCCCGCC TGCAACTCAC GCCAATGGAT TTTGGCTTGC GGGTTGAGGA TCATCCGGAT
ATGATGGTAA CAAGCGTAAT GAAAATGCGG GCCGCAGATA ATATGCGGCT AAACTACCAG
GGCACCCTTA CAGAAACATC GACACTCCCT GCTTCTGATA CCATACTCAA ATCCAATTTT
GAAGTGGCCG AGAACTTTAT TTTATCCCTG GGCGAAGCTG ATGCAGATTT CCGACCTAAA
AAGGTATGGT TCAACATTCC GGTCGCCCAG ATACAAGAGT TTTTAAAGGG GTATCAGACC
TACAAAGGCT TACCCACCGT AAACTCCGCA CGAATAAATA AGTATATTGA CATACAAAGA
ACAAAACCAT TGCCGGAATT TATGGAATGG AATGTCGCAT TGATTTCACT GAATGAAAGT
ACTGACCTGG AACCCGTATC ATTTGCCGGT TTCAGCATTT ACCCACACTC CCGCTCAGTG
AAAGAAGAGC GGACAAACAG TCTTTTTATA AAGAGAATGA TTGACCGGAA GGACGAGATA
GAAGATTTTA ATCCTGTTGA GAGGAAAGCT GTTGAAAACA ACAATCTGTC CAACATAGAA
ATCAGAAGTA TTAGTCCCAG AAAACAAAGG CCTTTGTTAA TGATATATGT TTTAAATATT
ACAGATAAAA CAAAGTCTGA AAATATTCCC TTTGAAAAAC AACCGGTTGG ATTTGCTATA
AGCTGGCCTG TGTCAGAAAC GGCTGTGCCA ATGAATTATG TAATTAATTC AGTTTATGCG
GAACTTGAAT TGAGTGAAGA TGATTAA
 
Protein sequence
MWSIAIGGDK LSRGLTLEGL TVSYFTRSTS LYDTLMQMGR WFGYRNGFED LCRIYTTPEL 
FRWYRHISTA FESLREEFIE MSRLQLTPMD FGLRVEDHPD MMVTSVMKMR AADNMRLNYQ
GTLTETSTLP ASDTILKSNF EVAENFILSL GEADADFRPK KVWFNIPVAQ IQEFLKGYQT
YKGLPTVNSA RINKYIDIQR TKPLPEFMEW NVALISLNES TDLEPVSFAG FSIYPHSRSV
KEERTNSLFI KRMIDRKDEI EDFNPVERKA VENNNLSNIE IRSISPRKQR PLLMIYVLNI
TDKTKSENIP FEKQPVGFAI SWPVSETAVP MNYVINSVYA ELELSEDD