Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0934 |
Symbol | |
ID | 8252028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1086989 |
End bp | 1088449 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644934589 |
Product | ATPase |
Protein accession | YP_003091218 |
Protein GI | 255530846 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0996649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000256881 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGATA AAGATGCGAA ATATGATATT GTAAGGCCGG AGGCAGAATT CCAGTTTCAA GCAGCAAGAT CTTATGGATA TTCAATAGAA ACATCCATCG CTGACTTGAT TGATAATAGT ATTTCTGCAA AAGCAACGAA AATAAATATA TCCTTTGGCG TGGACCGCTA CGCATCTTTT GTAAGAATTG AGGATAACGG CACTGGAATG AATGAAAAAC AATTGCGGGA TGCAATGAGA CTGGGTAGTT TAAACCCTCT TACTGAACGA AGCGATGATG ACCTTGGTCG GTTCGGCCTG GGTCTTAAAA CGGCGTCATT TGCACAATGC AGAAGATTCA CGGTTAAAAC GAAAAAAGCC AGGTTAAGGG AGTATGTGAG GTGTTGGGAT TTGGATTTCG TTTCTAAAAA AAAGGACTGG GTGTTATTGA AAGATTGTAT AGATCAGCAT TCCAGGACTA ATATGGGCGA GCTAACACTT GGCAATAATG GTACAATTGT ACTTTGGGAG AAAATGGACA GACTGATGGA GTCCGAGGAA CATAATCTGG ATAAAGAAAA TTTCTATAGA AAATTTGAAA ATGTTAAAAG ACATCTTGGA TTAATATTTC ACCGATATAT AGAGCGGGGC AATTTGGAAA TTACAGTGAT GAATGAGATT GTCAACGCAA TTAATCCATT TGATATATCT CCTGAATATC CCTCTCAAGA ATTACAGGAA GAAAAATTAT CAATTAAGGG GCAACCCATA CTTATTCAGC CTTATATTTT ACCCCATGAA TCTAAATTGT CTGCAGAGGA GAAGATACAA ATTCAAATGA TAAAAGGATG GACTGCACAT CAGGGGATTT ATTTATATAG AAATCAACGG CTAATTTCTG ATGGTGGTTG GTTGGATTTA GATTTCAGAT TAAAAGAAAA CCAACGTCTG TGCAGAATTT CCATTGATTT ACCAAACACT TTAGATAAGG AGTGGCAAAT CGACGTCAAA AAAGCATCTG CTAAAATTCC GGATTTAATC CGGAAAAGAA TTAAAGAAAT ATGTCTTTCT GCAATTGAGA AAGCTGTTAA GGTCTATACA CACAGAGGAG CATATATAAG GAGGAGGGGT GAAAAAAAAG ATACAACCTT TTTGTGGATT GCAAAGCAAA AGCAAGGAGT AAAGACATAT TCTATCAATG AACAACATCC TTTGTACGAG CTGTTATTCA ACCACCTTGG TACTCAATCA CTAATCTTTA AAGATTATGT GAAACTTCTT GCTGAAGCGA TCCCGGTTAA TCTGATAATA AATGACTTTG CTGATCCGAG ATTGACAATA GGTACTCCTT TGCAGAATAA AGTGGATGTC CTTGAAGAAA TATATAAATC TGCTCTCAAG GTATTAGTTG AATCGGGATC TTCTGAAAAG AATGCAATAG CCCAACTGAA TGCAATGGAT GTATTTCAGA AATTAAAATA A
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Protein sequence | MKDKDAKYDI VRPEAEFQFQ AARSYGYSIE TSIADLIDNS ISAKATKINI SFGVDRYASF VRIEDNGTGM NEKQLRDAMR LGSLNPLTER SDDDLGRFGL GLKTASFAQC RRFTVKTKKA RLREYVRCWD LDFVSKKKDW VLLKDCIDQH SRTNMGELTL GNNGTIVLWE KMDRLMESEE HNLDKENFYR KFENVKRHLG LIFHRYIERG NLEITVMNEI VNAINPFDIS PEYPSQELQE EKLSIKGQPI LIQPYILPHE SKLSAEEKIQ IQMIKGWTAH QGIYLYRNQR LISDGGWLDL DFRLKENQRL CRISIDLPNT LDKEWQIDVK KASAKIPDLI RKRIKEICLS AIEKAVKVYT HRGAYIRRRG EKKDTTFLWI AKQKQGVKTY SINEQHPLYE LLFNHLGTQS LIFKDYVKLL AEAIPVNLII NDFADPRLTI GTPLQNKVDV LEEIYKSALK VLVESGSSEK NAIAQLNAMD VFQKLK
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