Gene Phep_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0934 
Symbol 
ID8252028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1086989 
End bp1088449 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content36% 
IMG OID644934589 
ProductATPase 
Protein accessionYP_003091218 
Protein GI255530846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0996649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000256881 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGATA AAGATGCGAA ATATGATATT GTAAGGCCGG AGGCAGAATT CCAGTTTCAA 
GCAGCAAGAT CTTATGGATA TTCAATAGAA ACATCCATCG CTGACTTGAT TGATAATAGT
ATTTCTGCAA AAGCAACGAA AATAAATATA TCCTTTGGCG TGGACCGCTA CGCATCTTTT
GTAAGAATTG AGGATAACGG CACTGGAATG AATGAAAAAC AATTGCGGGA TGCAATGAGA
CTGGGTAGTT TAAACCCTCT TACTGAACGA AGCGATGATG ACCTTGGTCG GTTCGGCCTG
GGTCTTAAAA CGGCGTCATT TGCACAATGC AGAAGATTCA CGGTTAAAAC GAAAAAAGCC
AGGTTAAGGG AGTATGTGAG GTGTTGGGAT TTGGATTTCG TTTCTAAAAA AAAGGACTGG
GTGTTATTGA AAGATTGTAT AGATCAGCAT TCCAGGACTA ATATGGGCGA GCTAACACTT
GGCAATAATG GTACAATTGT ACTTTGGGAG AAAATGGACA GACTGATGGA GTCCGAGGAA
CATAATCTGG ATAAAGAAAA TTTCTATAGA AAATTTGAAA ATGTTAAAAG ACATCTTGGA
TTAATATTTC ACCGATATAT AGAGCGGGGC AATTTGGAAA TTACAGTGAT GAATGAGATT
GTCAACGCAA TTAATCCATT TGATATATCT CCTGAATATC CCTCTCAAGA ATTACAGGAA
GAAAAATTAT CAATTAAGGG GCAACCCATA CTTATTCAGC CTTATATTTT ACCCCATGAA
TCTAAATTGT CTGCAGAGGA GAAGATACAA ATTCAAATGA TAAAAGGATG GACTGCACAT
CAGGGGATTT ATTTATATAG AAATCAACGG CTAATTTCTG ATGGTGGTTG GTTGGATTTA
GATTTCAGAT TAAAAGAAAA CCAACGTCTG TGCAGAATTT CCATTGATTT ACCAAACACT
TTAGATAAGG AGTGGCAAAT CGACGTCAAA AAAGCATCTG CTAAAATTCC GGATTTAATC
CGGAAAAGAA TTAAAGAAAT ATGTCTTTCT GCAATTGAGA AAGCTGTTAA GGTCTATACA
CACAGAGGAG CATATATAAG GAGGAGGGGT GAAAAAAAAG ATACAACCTT TTTGTGGATT
GCAAAGCAAA AGCAAGGAGT AAAGACATAT TCTATCAATG AACAACATCC TTTGTACGAG
CTGTTATTCA ACCACCTTGG TACTCAATCA CTAATCTTTA AAGATTATGT GAAACTTCTT
GCTGAAGCGA TCCCGGTTAA TCTGATAATA AATGACTTTG CTGATCCGAG ATTGACAATA
GGTACTCCTT TGCAGAATAA AGTGGATGTC CTTGAAGAAA TATATAAATC TGCTCTCAAG
GTATTAGTTG AATCGGGATC TTCTGAAAAG AATGCAATAG CCCAACTGAA TGCAATGGAT
GTATTTCAGA AATTAAAATA A
 
Protein sequence
MKDKDAKYDI VRPEAEFQFQ AARSYGYSIE TSIADLIDNS ISAKATKINI SFGVDRYASF 
VRIEDNGTGM NEKQLRDAMR LGSLNPLTER SDDDLGRFGL GLKTASFAQC RRFTVKTKKA
RLREYVRCWD LDFVSKKKDW VLLKDCIDQH SRTNMGELTL GNNGTIVLWE KMDRLMESEE
HNLDKENFYR KFENVKRHLG LIFHRYIERG NLEITVMNEI VNAINPFDIS PEYPSQELQE
EKLSIKGQPI LIQPYILPHE SKLSAEEKIQ IQMIKGWTAH QGIYLYRNQR LISDGGWLDL
DFRLKENQRL CRISIDLPNT LDKEWQIDVK KASAKIPDLI RKRIKEICLS AIEKAVKVYT
HRGAYIRRRG EKKDTTFLWI AKQKQGVKTY SINEQHPLYE LLFNHLGTQS LIFKDYVKLL
AEAIPVNLII NDFADPRLTI GTPLQNKVDV LEEIYKSALK VLVESGSSEK NAIAQLNAMD
VFQKLK