| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0906 |
|---|
| Symbol | |
|---|
| ID | 8252000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1063547 |
|---|
| End bp | 1064947 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644934561 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003091190 |
|---|
| Protein GI | 255530818 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.766328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000114402 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA ATAATAAATA TATGAAATCC ATTTTAAAAG TAATTGGATG CATGTTTGTG
TTGATATTGG TAGTTTTTTC GGGCTGCAAA AAAGAATGGC TGGATGTTAA GTCTGATAAG
ATGCAGACGG TACCAGAGAC AGTAGTAGAT TTTCAGGCAA TATTGGATAA TTTTACGCTG
ATTCTAGTTG GGTTGGGAGA AGTTGCCGCC GACGGACATT ATTATACTGA AAGTGATTTC
ACGTCGATGT TACCACTCAA TGCTCATATT CAAAATGCAT ATGTCTGGAC TTCTATAAAT
CAACACGAAA ATATAACTCA AAATACTACT TTCTATACTT CGATTTATAG ACGAATCTTA
GATATGAATA TTATTCTAGA CTATGTCGAG AAATCAAAGG ACAAGGACCA TGCGGGGCTG
GGACAGGTAA AAGCCCAGGC ATTGTTCAAC CGAGGTCTAC TATACTTTGA ACTTGCGCAA
GTTTATGCTC CTGCATTCAA GACGAATAGT GCCAATTCAG ATCTTGGACT AGCACTGAGA
TTGTCGACTG ATATCACTGA AACATCTGTT CGATCAACCG TCAAACAAAC CTATGATCGA
ATTATTTCCG ATCTAACAAC TTCAAAAGAT GCTTTACCTA ATACATCTGA GTATTTATCA
AGAGCATCAA AATCGGCTGC TTTAGGGCTA CTTGCCAAAG TATATCTTTC TATGGGGGAT
TACTCAAACG CATTTACTTA TTCAAATGAG TATTTAAAGA TCAAAAGTGA GTTGTTAGAT
TATAATACAC TTTCAGTTGT AGCGAATTTT ATCGGAGTAA ACAAAGAAGT CGCATTTTTA
AATCTTTTGA GTGCCAGTTC TTATCTAAAT AGTCGTTACA GAATAGATCA ATCATTATTT
GATAGTTATG ATAATAATGA CTTAAGAAAG AAAATATTTT TTAATGTCAC TTCATCAGGA
ATACTGTTTA AAGGCCACTA CAGCAATAGT GCCTCTCATA TGTTTATCGG GCCAGCAACA
GATGAAATGT ATTTGATACG AGCAGAATGC AATTCGAGGG CGGGAAAATT ATCGGATGCT
ATGAAAGATT TAAATGACTT GTTAAGGACG AGGTACGCAA AGAATCCTGA TGGCTCAAGC
AAATATGTTG ACAAGATAGC GTTAAGTGAA ACCGATGCTT TAACTAAGAT CTTTGCAGAA
CGAAAAAAGC AATTGATATT GAGGAATGTG CGTTGGTCTG ACTTGCGGCG TTTAAACCAA
GATTCTAGGT TTTCGGTAAC ATTGAACAGA ACTATTGGTG GCAAACAGTA TACTCTAGAA
CCAAACAGTA ACGCCTACAC ATTTCCTCTA CCTTATGAAA TCATTCGGCT ATCGGGAATG
AAACAAAATC CTGGTTGGTA A
|
|---|
| Protein sequence | MKVNNKYMKS ILKVIGCMFV LILVVFSGCK KEWLDVKSDK MQTVPETVVD FQAILDNFTL
ILVGLGEVAA DGHYYTESDF TSMLPLNAHI QNAYVWTSIN QHENITQNTT FYTSIYRRIL
DMNIILDYVE KSKDKDHAGL GQVKAQALFN RGLLYFELAQ VYAPAFKTNS ANSDLGLALR
LSTDITETSV RSTVKQTYDR IISDLTTSKD ALPNTSEYLS RASKSAALGL LAKVYLSMGD
YSNAFTYSNE YLKIKSELLD YNTLSVVANF IGVNKEVAFL NLLSASSYLN SRYRIDQSLF
DSYDNNDLRK KIFFNVTSSG ILFKGHYSNS ASHMFIGPAT DEMYLIRAEC NSRAGKLSDA
MKDLNDLLRT RYAKNPDGSS KYVDKIALSE TDALTKIFAE RKKQLILRNV RWSDLRRLNQ
DSRFSVTLNR TIGGKQYTLE PNSNAYTFPL PYEIIRLSGM KQNPGW
|
|---|
| |