| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0887 |
|---|
| Symbol | |
|---|
| ID | 8251981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1041982 |
|---|
| End bp | 1042785 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644934542 |
|---|
| Product | protein of unknown function DUF323 |
|---|
| Protein accession | YP_003091171 |
|---|
| Protein GI | 255530799 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00321249 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC TTTCTTTATT AGTACTGCTC AGTTGTTTTC TTTGTTTGGC AAGCTTGTCG
GCATTTATAG ACACGACACA TATCGACCAG CACGCAATAT CAAAAAAGGG GATGGTATTG
GTTAAAGGTG GAACTTTTTA TATGGGATTG GATAGTAGCC AGCTAAAGGA TCTGGTTGCT
AAATTAAATG TACCTGCGTC TTCATTCTCG CAGGAATTTC CGGCTAATAA AACAATGGTA
CGCTCTTTTT ATATGGATAA GCATGAGGTT ACCAATGCCG ATTTTAAAAA ATTTATAGAT
GCGAATCCGG ATTGGGCTAA ACGTTATATT TCTGATAGTT TCCATAATGG TAATTACCTG
AAGGAATGGG ATTTGGACAG CTATAAAAAG GGAACAGAAG ACCAGCCGGT AGTTTACGTA
TGCTGGTATG CTGCCAAAGC TTATGCAAAA TGGAAGGGTA AGCGCCTGCC CGTGGAAGCA
GAATGGGAAT ATGCCGCTAA AAATGGTGTT GGCTTGCAAG ATATGGATGG TAGTGTTTCG
GAGTTTTGTG TAGATCAATG GAAGAAGGAT GCTTATGCTG AGCGAGCAGA ACGCGTAAAG
GAATTACTTT TATCTGGTAA AAGATATAAT TATCAGCATA GAAGCCTGAA GGCATACAGC
GCTGATAGTA TAGTTATTCG TGGAGGTAAG GTGAGCGGCC CCGCGGCAAA TCATCATCAT
ACCTGGCGCC AGGGTTATGG TAATAAAGAC TGCTCTGCAA CAGTAGGGTT CAGGTGTGTG
GCAGGTAATG ATAGTCAAAT CTAG
|
|---|
| Protein sequence | MKNLSLLVLL SCFLCLASLS AFIDTTHIDQ HAISKKGMVL VKGGTFYMGL DSSQLKDLVA
KLNVPASSFS QEFPANKTMV RSFYMDKHEV TNADFKKFID ANPDWAKRYI SDSFHNGNYL
KEWDLDSYKK GTEDQPVVYV CWYAAKAYAK WKGKRLPVEA EWEYAAKNGV GLQDMDGSVS
EFCVDQWKKD AYAERAERVK ELLLSGKRYN YQHRSLKAYS ADSIVIRGGK VSGPAANHHH
TWRQGYGNKD CSATVGFRCV AGNDSQI
|
|---|
| |