Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0886 |
Symbol | |
ID | 8251980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1040765 |
End bp | 1041697 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934541 |
Product | transposase and inactivated derivative |
Protein accession | YP_003091170 |
Protein GI | 255530798 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.615238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00714566 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCAGAG AAGATGCTAC AGAAGATCTG CTTGCCGAAC CTGTTGTTGT TTACAGCAAA GGCCAGGACG GCAGGCCTTA TTTTATTGAT CCGCTGGAAG ACCTGGGCTT CAAACGCCTG TTTAGTGCCG AGCAGAACAA AGACATTACC ATAACTTTCC TGAACCATGT ACTCAAAGGA AAACGTGAGG TTGTATCGCT CGAATTTCTA AAGAACGAAT ATCCCGGCGA AACCCAGGAA GAAGGCGGAG TGATAATTGA TATCGTATGC AAAGACCAGA TTGGGGCTTT CTTTCTGGTC GAAATGCAAA AAAGCTGGAA TCAAAACTTT AAGGAACGAT CCCTGTTTTA TGCCTCCAGG CTTATTACCG AACAGGCGCC ACACGGCAAT CGCAAAGAAT GGGCATACTC CCTGAAAGAT GTATATGTAA TTGCATTGCT TGAAAAATTT ACTATTAATG CCGGAAACAA AGGTAAATGG CTGCATGATA TAGCACTAGT CAATACAGAT ACAGGAAAGG TATTTAACGA AAGATTGCGT TTTACCTACA TTGAACTGCT CAGCTTTAAA AAAACAGAAA ACCAGCTGGA AACCGACCTG GAAAAATGGA TTTACGCCCT CAAAAACCTG AAACATTTAA AACAGGCACC TGCTGCATTT ACAGAGCCCC AATTGCTCCA GTTTTGCCAG GCTGCCAGAT ACATTAACTT AACAAAGGAG GAAAAGAATA TGATTAGTGC AAAAACTAAA GCCCGCTGGG ATTACTACTA TGCAATTGAC GGGGCAAAGA TAATGGGGCG CGAAGAGGGA GAAACCAGAG GAGCTCATCA AAAAGCAGCG CAAATAGCCA TCAAGCTTAA AAACAAAGGA GTTCCATTTA CAGAAATCCA GGAACTAACC GAACTCAGCA TTACAGAAAT AAAAAATCTG TAA
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Protein sequence | MRREDATEDL LAEPVVVYSK GQDGRPYFID PLEDLGFKRL FSAEQNKDIT ITFLNHVLKG KREVVSLEFL KNEYPGETQE EGGVIIDIVC KDQIGAFFLV EMQKSWNQNF KERSLFYASR LITEQAPHGN RKEWAYSLKD VYVIALLEKF TINAGNKGKW LHDIALVNTD TGKVFNERLR FTYIELLSFK KTENQLETDL EKWIYALKNL KHLKQAPAAF TEPQLLQFCQ AARYINLTKE EKNMISAKTK ARWDYYYAID GAKIMGREEG ETRGAHQKAA QIAIKLKNKG VPFTEIQELT ELSITEIKNL
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