Gene Phep_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0847 
Symbol 
ID8251941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp996808 
End bp997329 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content39% 
IMG OID644934502 
Productribosomal protein L10 
Protein accessionYP_003091131 
Protein GI255530759 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.283909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAG AAGAAAAACA CGAATTAGTT TCTGCGCTTC AAGTGAAGAT GCAGGAGTTT 
GGCAATTTTT ATATTGCTGA TACATCGAGC TTATCTGTTG AGAAAGTAAA CAGTATCCGT
CGTAAATGTT TTGAAAGCGG GATTGAAATG CAGGTTGCAA AAAATACTTT GATCAGAAAA
GCGATTGAAG GATTGGAAGG CGATGCATCA GAGATTTTCG TGGCACTTAA AGGTCAGTCA
GCCTTATTAT TCTCAACAGT AGGCAATGGT CCGGCTAAGC TGATCAAAGC GTTGAGGAAA
GGTTCTGATA AACCTGTGCT TAAAGCAGCT TATATCGATT CGACAGTATT TATCGGTGAC
AACCAGTTAG ATACTTTAGT AAGCCTGAAA TCAAGAGAAG AGCTTATTGG AGATATCATT
GGATTACTAC AGTCGCCAGC TAAAAACGTT ATATCGGCAT TACAGTCTGG TGGTAGCAAA
ATTGCAGGAA TTGTTAAAAC TCTTCAAGAG AGAGAAGGTT AA
 
Protein sequence
MNREEKHELV SALQVKMQEF GNFYIADTSS LSVEKVNSIR RKCFESGIEM QVAKNTLIRK 
AIEGLEGDAS EIFVALKGQS ALLFSTVGNG PAKLIKALRK GSDKPVLKAA YIDSTVFIGD
NQLDTLVSLK SREELIGDII GLLQSPAKNV ISALQSGGSK IAGIVKTLQE REG