Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0823 |
Symbol | |
ID | 8251912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 971961 |
End bp | 973352 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934473 |
Product | Radical SAM domain protein |
Protein accession | YP_003091107 |
Protein GI | 255530735 |
COG category | [R] General function prediction only |
COG ID | [COG1964] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAA GAGATTATAT TTATTACGAT TATACCAAAA GTTTGTGCCC GGAATGTTTA CAGCTCTGTG ATGCCAAAAT TGTGTTTCAG GACGCAAAGG TATTTATGCT GAAGAACTGC AGAACGCATG GTGACAGTAA GGTAATGATT GCTGATGATG TGGAATATTA TAAACAGATC AGGAATTATA ACAAACAGTC GGAAATGCCT TTAAAATTTA ATACAAAGGT GCATTATGGC TGTCCCTATG ATTGTGGCCT TTGTACAGAT CATGAACAGC ATTCCTGTTT AACCATTATA GAGGTAACCG ACCGATGTAA TTTAAGCTGC CCGACCTGTT ATGCCATGTC TTCGCCAAAT TATGGCCGGC ACCGTAGCCT GGAAGAGATC AATAAAATGA TGGATGTAGT GGTGGCCAAT GAAGGAGAAC CGGATGTGGT ACAACTTTCC GGTGGAGAGC CTACTGTACA TCCCGATTTT TTCAGGATAT TGGACCTGGC TAAAACCAAG CCCATCAAGC ACCTGATGGT GAATACCAAT GGGATCAGGA TTGCGAAGGA TATTGGTTTT GTAGAGAAGC TTGCAACTTA TATGCCCGAT TTTGAGATTT ACCTGCAGTT TGACAGTTTT AGTGCTGAGG TGCTGGAAAA ATTGCGTGGG GAGGACTTAA CGGAAGTAAG GAAAAAGGCA ATCGACCATT TAAACCAGTT TAATGTATCG ACCACCCTGG TAGTCACTCT TCAGAAAGGG GTAAATGATC ATGAAATTGG CGATATTCTG AATTATGCCC TAAAGCAGAA ATGCGTGCGG GGGGTAACTT TTCAGCCAAC CCAAGTTGCG GGAAGGAATG ACAATTATAA CGACCAGCAG GGCAGGATCA CCTTGACAGA AGTACGGCGG AAAATTTATG AGCAATATCC TTTATTTACC CCTCAGGATC TGATTCCGGT GCCCTGCAAC CCGGATGCCC TTTGTATGGC CTATGCATTA AAGCTGGATG ATGAAGTGAT CCCGATGACA CATCTGGTTA ATCCGGAAGA CCTGCTGAAC AATTCAAAGA ACACGATTGT ATTTGAACAC GATGAAAGGT TAAAAGAACA TCTGCTCAAT TTGTTCAGCA CGGGCGTCTC AGTTGATTGT GCAGAAGGTA CCTTTGGTGA ACTGATGTGC TGTTTGCCGA GGGTACAGTC GGACCATTTA AATTACAATA ACCTGTTTAG GATTATCATC ATGAACTTTA TGGATCCACT TGATTTTGAC GTGCGGGCCG TTAAAAAATC ATGTGTGCAC ATTGTGAGCG ATAAGATGAA GATCATTCCT TTTGAGACCA TGAACATTTT CTACCGTGAT CATAAAATAG ATACCATCCG TGAAAAATTA AATCTCAATT AA
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Protein sequence | MKVRDYIYYD YTKSLCPECL QLCDAKIVFQ DAKVFMLKNC RTHGDSKVMI ADDVEYYKQI RNYNKQSEMP LKFNTKVHYG CPYDCGLCTD HEQHSCLTII EVTDRCNLSC PTCYAMSSPN YGRHRSLEEI NKMMDVVVAN EGEPDVVQLS GGEPTVHPDF FRILDLAKTK PIKHLMVNTN GIRIAKDIGF VEKLATYMPD FEIYLQFDSF SAEVLEKLRG EDLTEVRKKA IDHLNQFNVS TTLVVTLQKG VNDHEIGDIL NYALKQKCVR GVTFQPTQVA GRNDNYNDQQ GRITLTEVRR KIYEQYPLFT PQDLIPVPCN PDALCMAYAL KLDDEVIPMT HLVNPEDLLN NSKNTIVFEH DERLKEHLLN LFSTGVSVDC AEGTFGELMC CLPRVQSDHL NYNNLFRIII MNFMDPLDFD VRAVKKSCVH IVSDKMKIIP FETMNIFYRD HKIDTIREKL NLN
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