Gene Phep_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0823 
Symbol 
ID8251912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp971961 
End bp973352 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content42% 
IMG OID644934473 
ProductRadical SAM domain protein 
Protein accessionYP_003091107 
Protein GI255530735 
COG category[R] General function prediction only 
COG ID[COG1964] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA GAGATTATAT TTATTACGAT TATACCAAAA GTTTGTGCCC GGAATGTTTA 
CAGCTCTGTG ATGCCAAAAT TGTGTTTCAG GACGCAAAGG TATTTATGCT GAAGAACTGC
AGAACGCATG GTGACAGTAA GGTAATGATT GCTGATGATG TGGAATATTA TAAACAGATC
AGGAATTATA ACAAACAGTC GGAAATGCCT TTAAAATTTA ATACAAAGGT GCATTATGGC
TGTCCCTATG ATTGTGGCCT TTGTACAGAT CATGAACAGC ATTCCTGTTT AACCATTATA
GAGGTAACCG ACCGATGTAA TTTAAGCTGC CCGACCTGTT ATGCCATGTC TTCGCCAAAT
TATGGCCGGC ACCGTAGCCT GGAAGAGATC AATAAAATGA TGGATGTAGT GGTGGCCAAT
GAAGGAGAAC CGGATGTGGT ACAACTTTCC GGTGGAGAGC CTACTGTACA TCCCGATTTT
TTCAGGATAT TGGACCTGGC TAAAACCAAG CCCATCAAGC ACCTGATGGT GAATACCAAT
GGGATCAGGA TTGCGAAGGA TATTGGTTTT GTAGAGAAGC TTGCAACTTA TATGCCCGAT
TTTGAGATTT ACCTGCAGTT TGACAGTTTT AGTGCTGAGG TGCTGGAAAA ATTGCGTGGG
GAGGACTTAA CGGAAGTAAG GAAAAAGGCA ATCGACCATT TAAACCAGTT TAATGTATCG
ACCACCCTGG TAGTCACTCT TCAGAAAGGG GTAAATGATC ATGAAATTGG CGATATTCTG
AATTATGCCC TAAAGCAGAA ATGCGTGCGG GGGGTAACTT TTCAGCCAAC CCAAGTTGCG
GGAAGGAATG ACAATTATAA CGACCAGCAG GGCAGGATCA CCTTGACAGA AGTACGGCGG
AAAATTTATG AGCAATATCC TTTATTTACC CCTCAGGATC TGATTCCGGT GCCCTGCAAC
CCGGATGCCC TTTGTATGGC CTATGCATTA AAGCTGGATG ATGAAGTGAT CCCGATGACA
CATCTGGTTA ATCCGGAAGA CCTGCTGAAC AATTCAAAGA ACACGATTGT ATTTGAACAC
GATGAAAGGT TAAAAGAACA TCTGCTCAAT TTGTTCAGCA CGGGCGTCTC AGTTGATTGT
GCAGAAGGTA CCTTTGGTGA ACTGATGTGC TGTTTGCCGA GGGTACAGTC GGACCATTTA
AATTACAATA ACCTGTTTAG GATTATCATC ATGAACTTTA TGGATCCACT TGATTTTGAC
GTGCGGGCCG TTAAAAAATC ATGTGTGCAC ATTGTGAGCG ATAAGATGAA GATCATTCCT
TTTGAGACCA TGAACATTTT CTACCGTGAT CATAAAATAG ATACCATCCG TGAAAAATTA
AATCTCAATT AA
 
Protein sequence
MKVRDYIYYD YTKSLCPECL QLCDAKIVFQ DAKVFMLKNC RTHGDSKVMI ADDVEYYKQI 
RNYNKQSEMP LKFNTKVHYG CPYDCGLCTD HEQHSCLTII EVTDRCNLSC PTCYAMSSPN
YGRHRSLEEI NKMMDVVVAN EGEPDVVQLS GGEPTVHPDF FRILDLAKTK PIKHLMVNTN
GIRIAKDIGF VEKLATYMPD FEIYLQFDSF SAEVLEKLRG EDLTEVRKKA IDHLNQFNVS
TTLVVTLQKG VNDHEIGDIL NYALKQKCVR GVTFQPTQVA GRNDNYNDQQ GRITLTEVRR
KIYEQYPLFT PQDLIPVPCN PDALCMAYAL KLDDEVIPMT HLVNPEDLLN NSKNTIVFEH
DERLKEHLLN LFSTGVSVDC AEGTFGELMC CLPRVQSDHL NYNNLFRIII MNFMDPLDFD
VRAVKKSCVH IVSDKMKIIP FETMNIFYRD HKIDTIREKL NLN