| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0762 |
|---|
| Symbol | |
|---|
| ID | 8251851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 889644 |
|---|
| End bp | 891536 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644934412 |
|---|
| Product | ATP-binding region ATPase domain protein |
|---|
| Protein accession | YP_003091046 |
|---|
| Protein GI | 255530674 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCCT GTGGCCGCAG TGCTGACCAG CGCCAGCCAC CCAGGATTTC GAAAAAGGAC
AGCTTAAAGA TTCAGCAATA TATTCAAAAG AGTATTTTTT ATCAGCAGGG CAAGCCTGAT
TCGGCACTGC ATTATGCCCG GGAAGGCCTG CAGCTTTCCC AGAAATTGCA TTACAGGCTG
GGCGAAGCTT TGTTGATCAA CCAGCTTTCG GCTATTAATG AAGTGTATGG GAACCTAGAA
CTTGCCAGCC GTTACCAGAA AGAGGTACTG GTCATCTATA AGCAATTAAA AAACCGATCC
GGGCAGGCTG CGGCACATGC ACAGCTGGGC ATGCTGGAAG CCGGGCAGGG GCGGACGAAA
TTGGGAATGA AGCAATTGGG GCAGGCTTTA GCCCTTTATA AGACCCTGGC CGATACACCG
GGTATGGTAG CTGTTTATAC CCGGCTTGGC GAGGTAAATG AACTTGATCA CCAATTGAAG
CAAGCTATGG CTTTTTACAT AAAAGCCAAA CAACTCAACA AAGACCAACC AGTTAAAGAC
GATTATTTTG TGTTGCTGAA CAATATGGCC CGCCTGAATG TGAAAAAAGG ACTTCCGCGG
GAAGCTTTGC GGTATTATAG GGAAGGAATT GAAAAAAGCA GTAGTCCGGC AGCTGTTAAA
ACACACATCC GGTTTTTGCA CAGTGCAGGC CATATGCTGG ATACGCTTGA CAGTGCCAAA
GAAGCCTTAG TTTATCACCG CATGGGTTTG CAAAATGCCA GGGCTCACAA CCTGAAGGAG
GATGAAGCAA GGTCTTTGCT GGTAATGGCA AGAGCGGTGA AAGATGAAGA TGCACAAAAA
GGAATTCAGC ATTTGAAAAC TGCATTGGAC CTTGCACAGG AAATTGGCCA TAAACAATTG
TCGGCAGAAA TTTATAAAGG CCTTACCGAA CTGTATAACC AGCAGTCTAT GCATAAAGAA
GCGCTAAATG CTTTAGAGAT GCACCACCGG TTAAACGATA GCCTGTCCAA TATAAACAAA
GCACATAAGC TCCTGGTATT GCAAAACAGT TATGAACTTG CGGCCAGAAG GGCGCATATT
GAAAGCCTGG AGTTAAGCAA CCAGGAAAAA ACCTACCAGC GCAACATCGG TATCGGATTG
GCCATTGCAG CATTTGTTAT TTTGGCAATT ACAGCTTTCT ATTTTTATAA GACCCGTATG
TTGAACAAAA GGCTTATAGA AAGCAACAGG ATCAAAGATC AGTTATTTTC TATTATAGGG
CACGACCTGC GTAATCCTGT GGGGGGGATT ACCCAGCTGC TTGCGGTAAT GGACGAACAG
GAACTGAGCC TGGAAGAGCT CCATCAGATG ATCTCGGCCA TGCGGAAACA GGGCGATGTA
GCACTTGAGA TCTTGAATGC CTTGCTGAAC TGGGGAGAAG CCCAGCTTAA AGGTGTCAAT
GTGAAAGCCA GCCATTTTAG TCCCCTTACC TATATCCAGA AAAATCTGGC CGCATTGAAT
AAACAGGTTA CAGATAAGTC TTTGCGGATA GAAAATACCG TTGCAGCAGA GCTTAGGATC
AGTGGTGATG CAGACCACTT TGATTTTATC ATCAGGAACC TGCTTTCCAA TGCCATCAAA
TTCAGTTATC CCGGAAAGAC AATATGGGTC AATGCAGATG TATCTAATCC GGAAAAGGTA
ATATTTTCAG TAAAAGATGA GGGCAAAGGA ATTACTGAAA TGCAGCAAGC CCTGTTTTTA
AAACAAAATC TGGACATTAC CTACGGAACA AGCGGAGAAA AGGGTACAGG GATAGGTTTA
ATGCTTTGTC TGGAGTTTAT AAAAGCCAAC CATGGCAAGC TGTGGCTGAT CAGTACTCCT
GGAAATGGCA CTACTTTCTT TTTTTATTTT TAA
|
|---|
| Protein sequence | MAACGRSADQ RQPPRISKKD SLKIQQYIQK SIFYQQGKPD SALHYAREGL QLSQKLHYRL
GEALLINQLS AINEVYGNLE LASRYQKEVL VIYKQLKNRS GQAAAHAQLG MLEAGQGRTK
LGMKQLGQAL ALYKTLADTP GMVAVYTRLG EVNELDHQLK QAMAFYIKAK QLNKDQPVKD
DYFVLLNNMA RLNVKKGLPR EALRYYREGI EKSSSPAAVK THIRFLHSAG HMLDTLDSAK
EALVYHRMGL QNARAHNLKE DEARSLLVMA RAVKDEDAQK GIQHLKTALD LAQEIGHKQL
SAEIYKGLTE LYNQQSMHKE ALNALEMHHR LNDSLSNINK AHKLLVLQNS YELAARRAHI
ESLELSNQEK TYQRNIGIGL AIAAFVILAI TAFYFYKTRM LNKRLIESNR IKDQLFSIIG
HDLRNPVGGI TQLLAVMDEQ ELSLEELHQM ISAMRKQGDV ALEILNALLN WGEAQLKGVN
VKASHFSPLT YIQKNLAALN KQVTDKSLRI ENTVAAELRI SGDADHFDFI IRNLLSNAIK
FSYPGKTIWV NADVSNPEKV IFSVKDEGKG ITEMQQALFL KQNLDITYGT SGEKGTGIGL
MLCLEFIKAN HGKLWLISTP GNGTTFFFYF
|
|---|
| |