| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0732 |
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| Symbol | |
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| ID | 8251820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 851666 |
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| End bp | 853732 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644934381 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003091016 |
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| Protein GI | 255530644 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.244967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT TTTTTACCGG CTGTTTAACT GCACTTTGTT TTTCAGGGAT AGCCCAGGTC
AAATCCGACA GCACAAAAAA ACTTAATGAG GTTGTGATCC GCCCCTACTT CTCTGCCCAG
CCACTGATCC GGTCAACAGG AGCCATTGGG GTACTGGATC AGACCACACT GGACAAACAG
CCTGCCGGAT CCTTCGTCTC TGCCATCAAT ACCATTTCCG GTGTACGGAT GGAAGAACGC
TCTCCGGGCA GTTACCGTCT GTCTATCCGC GGCAGCTTAT TGCGCTCTCC TTTTGGGATA
AGAAATGTAA AAATCTATTT TGACGATTTT CCTTTAACAG ATGCGGGTGG CAACAGCTAC
TTAAATGCGC TGGATGTATC GGCAGCCTCC GGAATACAGG TATTAAAAGG TCCGCACAGC
AGTATATTTG GCGCCAATTC GGGCGGTGTA ATCCTGATCC AGCCGCGGGG CAGTCAGCCC
GACAGCACTG CGCTGTCTTT AAACCTGGAA GGCGGCTCTT ATGGTGCCTT CAGGGAAGGC
CTGTCCCTAA ACCAGCAGTT CAACAAATAC AGCCTGAACA TTACCCAGGC CTATCAGCGC
AGCGATGGCT ACCGCGACCA TAGTGCTATG GACCGCAAGT ATTTTCAAAC CCTGCACAAA
TGGGACTATA CTAAAAATGC CGCACTGAAG GCTTTGTTAT TTTATTCCGA CTTACATTAC
AATACTCCCG GTGGCCTTAC CCCAGCCGAA TATCTGCAAA ACCCTAAACT CTCCAGGCCC
GCTGCCGGCC CTTCAAAAAG TGCAATAGAA CAGCAGGCGG GCATTTACAG CAAAACCCTT
TATGGGGGGC TTTCCCATAA CTGGCAGCTC AGCGATCGGT TTAAACATAT AGTCTCCATA
TTTTCTTCTT ATACCGATTT TAAAAATCCC TTCATCAGCA ATTACGAAAA ACGCAAAGAG
TTTACCCTGG GCTTACGCAC CTTCCTGGAA TATGAAAAGA AGCTAACTCA AGCAAACTGG
AAATTTGACC TGGGCATAGA AAGTATGGAA ACCCGTTCAG ACATTAGCAA TTACGACAAT
AACAAGGGGC TGACTGCCGC ACTGAAAGCC TCAGATAAAT TAAAGGCTGC TTCCAGTTTT
GCTTTCGCAC ACTTAAGTAT CGATGTACGG CAGAAATGGC TGTTCGAACT TTCGGCAAGC
GCCAATTTAT ACCAATATGC CTATCAGAGC ATTGCCCCTG TGGCCATTGC CGAACGAAAA
AACAGCTTTG ATACCCAGTT TATGCCAAGG GCAGCACTAT CTTATCTGAT CGGCACACAG
TTTTCAGTCA GAACTTCCAT AAGCAAAGGT TATTCAGCCC CTAGTCTGGC CGAAATAAGA
GCCTCCAACA ATGTGATCAA TGTAGATCTG CAGCCAGAAT ATGGCTGGAA TTACGAAGCT
GGACTAAGGT ACCAGGCCCT GAACAACAGG CTGCTCATAG ATGTTACTGC TTTCTATTAC
AACCTGAAAA ATGCAATAGT AAGACGTCTG GACCAAAATG ATGCAGGATA TTTTATCAAT
GCCGGCGGTA CAAAACAACC TGGCCTGGAA AGCACAGTTT CATTCTGGCC GATACCTACC
CGTACCTCAG GCGCTGTAAG AGGTTTGCAA CTCCGCAATA CCTATACCCT TAGTCGCTTT
AAATTTGACA ACTACATCGA CAAAACCAAT AACTTTTCGG GCAATGCCCT TACCGGAGTA
CCTAAAACCA TGTTGGTTAG CAGCGCCGAC ATACAATTGC CCAATCAGGT TTACATCTTT
CTGCAGCATA GCTTTACTTC GCAGATCCCG CTAAATGATG CCAATACGGC CTATGCAAAA
AAATACCACA TCCTGCAGGC CAAAATCAGC TGGAAAAATT TACGTATCGG CCGTACTCCT
GCAGAACTCT TTACCGGTGC AGACAATATA CTCAACCAAA GATACAGCCT GGGCAATGAC
CTGAATGCCT TTAACGACCG CTATTACAAT GCAGCCGCCA AACGTACTTT TTATGCCGGC
CTGCTGCTCC GGCTTAACCA CTTATAA
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| Protein sequence | MKTFFTGCLT ALCFSGIAQV KSDSTKKLNE VVIRPYFSAQ PLIRSTGAIG VLDQTTLDKQ
PAGSFVSAIN TISGVRMEER SPGSYRLSIR GSLLRSPFGI RNVKIYFDDF PLTDAGGNSY
LNALDVSAAS GIQVLKGPHS SIFGANSGGV ILIQPRGSQP DSTALSLNLE GGSYGAFREG
LSLNQQFNKY SLNITQAYQR SDGYRDHSAM DRKYFQTLHK WDYTKNAALK ALLFYSDLHY
NTPGGLTPAE YLQNPKLSRP AAGPSKSAIE QQAGIYSKTL YGGLSHNWQL SDRFKHIVSI
FSSYTDFKNP FISNYEKRKE FTLGLRTFLE YEKKLTQANW KFDLGIESME TRSDISNYDN
NKGLTAALKA SDKLKAASSF AFAHLSIDVR QKWLFELSAS ANLYQYAYQS IAPVAIAERK
NSFDTQFMPR AALSYLIGTQ FSVRTSISKG YSAPSLAEIR ASNNVINVDL QPEYGWNYEA
GLRYQALNNR LLIDVTAFYY NLKNAIVRRL DQNDAGYFIN AGGTKQPGLE STVSFWPIPT
RTSGAVRGLQ LRNTYTLSRF KFDNYIDKTN NFSGNALTGV PKTMLVSSAD IQLPNQVYIF
LQHSFTSQIP LNDANTAYAK KYHILQAKIS WKNLRIGRTP AELFTGADNI LNQRYSLGND
LNAFNDRYYN AAAKRTFYAG LLLRLNHL
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