Gene Phep_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0719 
Symbol 
ID8251807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp832221 
End bp834584 
Gene Length2364 bp 
Protein Length787 aa 
Translation table11 
GC content43% 
IMG OID644934368 
Producthypothetical protein 
Protein accessionYP_003091003 
Protein GI255530631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAG GAAAAAACGC GGTACGATTT TTTAATTTAC TTGTTTTATT TATAATCCTG 
TTTTCCAATA ACGCTGTTAA GGCACAAAAA CAACCCGTTT ATAGCATCTC CCAGGCCAAA
CAGTTCAAGA CGCTGATGGA TACGGTAAGG AAAGATATGC CGGTAGAGAA ACTATACCTG
CACCTGGACA AGTTCAATTA CCTTGCGGGC GATACACTTT GGCTTAAGGC CTATTTACTG
GAAGGACCTT TTTTAATGCC ATCCAGCAAA AGTGGACTGT TTTATGTTGA ACTGGTAAAT
GCTGAAAATA AAGTATTGAA ACGGATGAAA TTTCCGGCTA AATATGGGAT GGGTTGGGGT
AACATCAGCC TGGATGAAAG GGACTTGCCA ACAGGCAATT ACCTGCTGCG CGCCTACACC
AACTGGATGC TTAATTTTGG TGAGGCCGCT GCTTATACCG CAAACATTTA TATCAGTAAT
GCAACGTTAC CGGGCAATGC TGCAGTTTTA AAAAAGGCTG TTAAAAACCT CAATACACCT
CTTATTCCAA ACACCGGAAC TACTTTAGGC ATAAATAGTT CTCCGGAAAA AGCAGATATG
GAACTGACCA TTACTGCTGA AGGGGAAGCT AAAAATTTAT CAGGTTATTA CCTTGTTGGC
CAGTCCAGAG GTGTAGTTTG CTATGCCATT CCGGTTAACT TAAAAGACGG AAAGATTGTA
AACGCTGTTC CAAAGAGCCT GTTCCCTACC GGTATTGCAA GGTTTACCCT TATTGATAAA
AATCTGAAAG CACTGAATGA AAGGATGATC TATATTGATC AGCACGACCA GCTGAAGGTC
AACGTCAATA CGGTGCAGGC CGTTTACAAA AGCAGGGACA GTATTGCGCT GCGGATAAAG
GTTACAGATA AGAACAATGA GCCTGTACAG GGAAGTTTCT CCCTGTCGGT AACCGATGAC
AGCCAGGTTG CTCAGGGCCC TACTAAAAAC GGGGACCTGA ATACCTATAT GCTGCTTTCC
TCAGAACTGC GCAATCAGCC TAAAAGTGCA GATGCATACA GCAACGGTAC TGTTGCTGCC
CAACAGGCAT TGGATAGTCT GGCACTTACC GCTGGTTGGT TGGGCTATAA CTGGAACGAG
CTGTCAAACT ATAAAATACC TAAATATAGC GCCGAACCGG AATTTATGAT TACAGGAAAA
GTAAGCTCAA CTTTTTCAGG ATTGGCGGGG GCAAAAGTTA GTTTATTTGT AAAAAAACCT
CTACTGTTTA TGGATACCGT TGCCGGCCCA GATGGAAGGT TCATTTTCAA AAACCTGCCC
ATTGCAGATA CGGCAGTTTA TAAAATACAG GCCACTAATA AAAAAGGTAA AAACTTCTTT
GTGAACCTGG AAGTAGATGA ATGGAAACCG CCCGTGTTCA GCCCTTTACT TGTAAATTAT
TCAACCGAGG CCCAGGTAAA AGACCCCGCT CTTGAGCAGA AGGTAGAAAA AGCCCTTGCG
CTAAAACAAC AGCAGGATAA ATCTACCGGA AAGCTATTGA ATGAAGTGAA CATTGAAGCA
AAAAAGATAG TCAAGGGTTC ACATAATTTG AATGGATCAG GCGAGGCCGA TCAGGTTTTA
ACGGAAAGCG ACCTGTTAAA AGAGGGTAAA AGGCCATTAT ACGAGTTGCT AATGGCACGT
ATACCCGGTT TGGTTATGGG CAGCTATTTA TATCCCCCAT CTAAAATAAG AAAGTTTGGC
TTGAAGCTTA AAAATCAGCT GGTTAAAATT ATCATAGATG GTATAGACCT GGACCAGAGC
TACGAGTACT GGCAGCTGAT GGCAGATGCC GATGATTCCG CAGAAGGTTT GCAGGAGCGA
TATACGCACA TCAAAACGAA CCTTGACAAT TTTACAGCCG AAGATGTGAA AGGAATAGAG
GTAATGTACA ATGCTTCTTA TAATGTAAAA TACAACAATA AGTTTTTAAG TACGGCCGAA
ACCTCATTTA GCGGAAAAGG TGGGCTAACC GGAGTTGGTG GTGCTTCGGG CATAGATTAT
ACCTATATAG AAATCACCAC CCGAAATGGC AGAGGGCCTT TCATGAAACA AACACCCGGA
ACTTACCTGT ATAAACCGCT CGCTTTTTCA CTGCCAAAAA AATTCTATAG CCCAAAATAC
CTTAACAAGG ATAGTAGTGT AACCGATATC CGTTCTACTA TTTATTGGGA ACCCAATATC
ATTACCGATG AAAAAGGGGA AGCCACTGTA TCATTTTATG CCGCAGGGCA ACCGTCCAGT
TATACCATTG TTGTGGAAGG GAGCGATATG AACGGACAGC TGGGCTCGGC ACGCATGCCT
GCCCTTATAA AAATAGCGCC TTAA
 
Protein sequence
MKQGKNAVRF FNLLVLFIIL FSNNAVKAQK QPVYSISQAK QFKTLMDTVR KDMPVEKLYL 
HLDKFNYLAG DTLWLKAYLL EGPFLMPSSK SGLFYVELVN AENKVLKRMK FPAKYGMGWG
NISLDERDLP TGNYLLRAYT NWMLNFGEAA AYTANIYISN ATLPGNAAVL KKAVKNLNTP
LIPNTGTTLG INSSPEKADM ELTITAEGEA KNLSGYYLVG QSRGVVCYAI PVNLKDGKIV
NAVPKSLFPT GIARFTLIDK NLKALNERMI YIDQHDQLKV NVNTVQAVYK SRDSIALRIK
VTDKNNEPVQ GSFSLSVTDD SQVAQGPTKN GDLNTYMLLS SELRNQPKSA DAYSNGTVAA
QQALDSLALT AGWLGYNWNE LSNYKIPKYS AEPEFMITGK VSSTFSGLAG AKVSLFVKKP
LLFMDTVAGP DGRFIFKNLP IADTAVYKIQ ATNKKGKNFF VNLEVDEWKP PVFSPLLVNY
STEAQVKDPA LEQKVEKALA LKQQQDKSTG KLLNEVNIEA KKIVKGSHNL NGSGEADQVL
TESDLLKEGK RPLYELLMAR IPGLVMGSYL YPPSKIRKFG LKLKNQLVKI IIDGIDLDQS
YEYWQLMADA DDSAEGLQER YTHIKTNLDN FTAEDVKGIE VMYNASYNVK YNNKFLSTAE
TSFSGKGGLT GVGGASGIDY TYIEITTRNG RGPFMKQTPG TYLYKPLAFS LPKKFYSPKY
LNKDSSVTDI RSTIYWEPNI ITDEKGEATV SFYAAGQPSS YTIVVEGSDM NGQLGSARMP
ALIKIAP