Gene Phep_0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0709 
Symbol 
ID8251797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp816956 
End bp818152 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content43% 
IMG OID644934358 
ProductFecR protein 
Protein accessionYP_003090993 
Protein GI255530621 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAC AGCGGGAAGA GCTCACATTA TTATTTAAAC GTTACCTGGC AAATGAATGT 
TCTGAAGAAG AAGAACAGGT ATTTCTGGAA CTGTTAAGGT CTGGGGAACA TGAAGTGTTT
TTCAAGGATT TGATCGATAG CGAGCTAAAA CAGCAGCCTG ATCCACAGTT TAAGGATTTG
CCCCAGGTTA AAGAAGATTT AGCGCAAACG AAGCGGCAGA TTCTTCTGCA GATCAATGCC
GGGAAAATTC ATCAACATCC TGCTAAAAAG AGATTATGGT TTAAAATAGC GGCCGTATTC
TTATTGTTTG CCGGGGCCAT ATTCTTTAAA GTACATTTTG ACAAACAAAA CCTGCAGGCA
GACGTGGCAC CTGGCGGAAA TAAAGCCATT TTAACCCTCG CCGATGGATC GGAGATCATC
TTAGATCAGG TAGGTAAAGG TAACCTGGCT CGACAGGCCG GTGTTCAGGT TGTTAAAACT
ACAAATGGGC AGCTGGTATA TACCGTCAAG GAAATTTACG ATTCGGGTAA GGGTATCGCG
GGCAATTTAA CCAATACCAT TTCAACACCA AGAGGTGGAC AATATCAGGT AAATCTACCC
GACGGTACCC GGGTTTGGCT CAATGCCGCG TCCTCACTCA GATTCCCTTT AAGTTTTGCT
AAACTGAATG AGCGGAAGGT CGAGTTGAAA GGAGAAGCTT ATTTTGAAGT AGAAAAGGAT
GCTACAAAGC CCTTTATAGT TCGGTCAGAC CGGCAAACCG TACAGGTATT GGGTACTCAT
TTTAACATCA ATTCTTACGA AGATGAGCCA GATACCAAAA CTACCTTATT GGAAGGTGCT
GTAAAAGTTA CTGCATTAAG CGGAGCAAAG AGCGAACAGG CTTTCTTAAA ACCCGGACAA
CAGTCGCGCA TCAGCGCTGG TTCAAAACCT ATAAATGTCA TGCGGGTAGA TCCTATGGCC
GAGATCGCCT GGAAAAACGG GCAGTTCTTT TTTGAAAATG AATCTATTGA AAATATTATG
AAGCAGATTT CGCGCTGGTA TGATGTAGAG GTGATTTATG AGGATGATGT AGCAGGCAAA
ACTGTGTGGG GTTCAGTAAC ACGCTACGCC AATGTATCGA AGGTATTGTC CATACTGGAA
TTAACAGGGG AAATCCATTT TAAAGTTGAA GGAAGGAGGA TCATTGTGCA CAAATAA
 
Protein sequence
MDKQREELTL LFKRYLANEC SEEEEQVFLE LLRSGEHEVF FKDLIDSELK QQPDPQFKDL 
PQVKEDLAQT KRQILLQINA GKIHQHPAKK RLWFKIAAVF LLFAGAIFFK VHFDKQNLQA
DVAPGGNKAI LTLADGSEII LDQVGKGNLA RQAGVQVVKT TNGQLVYTVK EIYDSGKGIA
GNLTNTISTP RGGQYQVNLP DGTRVWLNAA SSLRFPLSFA KLNERKVELK GEAYFEVEKD
ATKPFIVRSD RQTVQVLGTH FNINSYEDEP DTKTTLLEGA VKVTALSGAK SEQAFLKPGQ
QSRISAGSKP INVMRVDPMA EIAWKNGQFF FENESIENIM KQISRWYDVE VIYEDDVAGK
TVWGSVTRYA NVSKVLSILE LTGEIHFKVE GRRIIVHK