Gene Phep_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0623 
Symbol 
ID8251711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp732926 
End bp733714 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content39% 
IMG OID644934272 
Productmethionine aminopeptidase, type I 
Protein accessionYP_003090907 
Protein GI255530535 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAA TCTATTACAA ATCTCCGGAA GAGATAGAGT TAATAAGAGA AAGTTCTTTG 
CTGGTATCAA AGACCTTAGC TGAAGTTGCT AAGGTCATTG GTCCGGGAGT AACAACAAAG
AAGCTTAATG ATCTGGCTGA GACATTTATA AAAGACCATG GTGCGATCCC TGCTTTTTTA
AATTATAATG GATTTCCTTA TTCTTTATGT ATTTCACCAA ATGAACAGGT TGTTCATGGA
TTTCCTGGGG ATTATGTAAT TCAGGAAGGA GATTTGATCT CTGTAGATTG TGGTGTGATC
AAGAATGATT TTTTTGGGGA TTCGGCATAT ACTTTTTCTA TTGGAGAGAT CGACAGCGAG
CGTCAGAAAC TTGTGGAAGT AACACAGGAA TGTCTGAAAC TGGCTATAGA AAAGGCTGTG
GTTGGTTCGA GAATTGGTGA TGTGGGATTT GCAGTACAAG CTTATGCAGA GGCAAATGGA
TTTGGAGTAG TGAGAGAATT GGTTGGTCAT GGTGTTGGAG TTAAATTACA CGAAAAACCC
GAGGTGCCTA ATTATGGCAA AAGGGGAAGT GGAATTAAAC TGGAAGAGGG AATGGTGATT
GCGATAGAGC CGATGATCAA TGCAGGTACG GCAGGGGTTA AATTTTGGTC TGATGGATGG
ACTGTAACCA GTAAGGACAA TAAGCCATCG GCACATTTTG AGCATACTGT TGCGGTTAAA
AAGGGGAATG CAGATGTTTT ATCAACCTTT TCATTCATTG AAGAAGTTTT AAAGAAAAAA
AGTAAATAA
 
Protein sequence
MSKIYYKSPE EIELIRESSL LVSKTLAEVA KVIGPGVTTK KLNDLAETFI KDHGAIPAFL 
NYNGFPYSLC ISPNEQVVHG FPGDYVIQEG DLISVDCGVI KNDFFGDSAY TFSIGEIDSE
RQKLVEVTQE CLKLAIEKAV VGSRIGDVGF AVQAYAEANG FGVVRELVGH GVGVKLHEKP
EVPNYGKRGS GIKLEEGMVI AIEPMINAGT AGVKFWSDGW TVTSKDNKPS AHFEHTVAVK
KGNADVLSTF SFIEEVLKKK SK