Gene Phep_0614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0614 
Symbol 
ID8251702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp728016 
End bp728582 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content36% 
IMG OID644934263 
Productribosomal protein L5 
Protein accessionYP_003090898 
Protein GI255530526 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.630653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACG TACCAAGATT AAAAAGTAAA TATAAAGAGG AAATTGTAAC TGCACTTAAA 
GATAAGTTCA ATTACAAAAG CGTTATGCAG GTTCCTAAGT TAGAGAAGAT TGCTATCAAC
CAGGGGGTTG GTCGTTTCTC TGTAACTGAC AAAAAGATTA TGGACAGCTC TATTTTAGAG
ATGACCACGA TCTCAGGTCA GCAAGCAGTT GGCGCAAAAT CTAAAAAAGA TATCTCAAAC
TTTAAATTGC GTAAAGGTAT GCCGGTTGGT GTACGTGTAA CTTTACGTGA TAACAACATG
TATGAGTTCT TAGATCGTTT AATTTCTGTA GCTTTGCCAC GTATCCGTGA CTTCAAAGGT
ATCAACGATA AAGGTTTCGA TGGAAAAGGA AATTACACTT TAGGTGTAAC TGAGCAGATC
ATCTTCCCTG AGATCAACAT AGATAAGATC AGCAAGATTT TAGGTATGGA CATTACTTTT
GTAACCACTG CGACTACAGA TGTTGAGGCA TTGGAACTTT TAAAACAATT TGGGTTACCA
TTTAAAAATC AAAAAACAGA GCAATAA
 
Protein sequence
MAYVPRLKSK YKEEIVTALK DKFNYKSVMQ VPKLEKIAIN QGVGRFSVTD KKIMDSSILE 
MTTISGQQAV GAKSKKDISN FKLRKGMPVG VRVTLRDNNM YEFLDRLISV ALPRIRDFKG
INDKGFDGKG NYTLGVTEQI IFPEINIDKI SKILGMDITF VTTATTDVEA LELLKQFGLP
FKNQKTEQ