Gene Phep_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0607 
Symbol 
ID8251695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp725070 
End bp725432 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content37% 
IMG OID644934256 
Productribosomal protein L22 
Protein accessionYP_003090891 
Protein GI255530519 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.886368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAG TAGCGAAATT AAACAATTGT CCAACCTCAC CACGTAAAAT GCGTTTGGTT 
GTAGATCTTA TCAGAGGTGA GCGTGTTGAG AAAGCTTTAC ATATTTTAAA GTTTACCAAT
AAAGATGCAG CAATAAGGGT TGAGAAACTA TTATTATCGG CTATCAAAAA CTGGGAAACT
AAAAATGAAG GTTCTCGCCC TGAAGAAAAC CAGTTATACG TGAAAACGAT AATGGTAGGC
GGTGGTCGTC AGTTAAAAAG ATTAAGACCA GCACCTCAAG GACGTGGTTA CAGAATACGT
AAGCGTTCAA ACCACGTAAC TTTGATAGTA GATAGTAAAA ACGTTGAAAC TCAAACTAAT
TAA
 
Protein sequence
MEAVAKLNNC PTSPRKMRLV VDLIRGERVE KALHILKFTN KDAAIRVEKL LLSAIKNWET 
KNEGSRPEEN QLYVKTIMVG GGRQLKRLRP APQGRGYRIR KRSNHVTLIV DSKNVETQTN