| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0575 |
|---|
| Symbol | |
|---|
| ID | 8251662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 692262 |
|---|
| End bp | 693230 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644934223 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003090859 |
|---|
| Protein GI | 255530487 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TCGTAACCTT ACTTTGTGTG TTGTCCTTTT GGATAATTGC ATGCTCTTCA
AAGAAAGCGG TATCTGTACC TGATCATTCA GCGCCATCCC TTGATTATAA AAATACCAAC
CTGATCATTA CCGATCAGTC GCAAAACCGG ATAGCCAAGG TAGACCTCAA AACGCAGGCC
ATCGTTTGGG AATGGAAGGC CGCTACAGGC ATTCCGGCAA AAGATGTGGC CTGGTTTAGC
AACATCAGCG AAGGGAAACT GGTGTACAGC GGAAAATATA TGCTCATCAC CGCTTCTGGT
GGCGGTGTAG CCCTGGTTAG GATTTCTGAT AAGGCAACCG TATTTTATTG TTATGTAGGT
GGCAATACAC ATTCGGCCGA GATCCTTCCA GATGGAAATA TTGTTACTGC TTCGAGTACA
GGAAAACTGC TTACCCTCAT CCATGTAAAC CTGAACAGCT TCCCCGATAA TGTTTATAAA
AAAACAATGG TACTGGATGA TGCCCATAAT GTAGTATGGG ACAAACAGCG CCAGATACTT
TGGTCGGCAA ACAAAGACAA ACTTGTAGCC TATACTTATA ACTTTAACTG CAACGCTCCC
GACCTTACCG TAAAAGAAAG TATAAATTTG CCGGCTAGTG GTTGCCACGA CCTGTTTCCT
GTATATGGCG AAGATGCTTT ATGGGTGTCT ACAAGTACCA AAGCCTGGAA AGTTGACCTT
AAAACCCGGA ATATAAAAGA ATCATCGGCC CTGCCGCGGA TTAAAAGTGT GGATTCAGGC
CCTGAAGGCT ATCCTGTAAT TACCCTTCAG GGAATAGATA CCGACCAGCA ATGGTATAAC
GATAAGGTTC AGGACCTAAA TGGTAAAACC ATTTTTCAAA TGGCTGGCTT AAAAATGTAC
AAAGCAAGGT GGGATCTTAA AAATGATTTT AGTTATTCCG CAAATGATGA TATAAAAACC
TGTAACTAA
|
|---|
| Protein sequence | MKKIVTLLCV LSFWIIACSS KKAVSVPDHS APSLDYKNTN LIITDQSQNR IAKVDLKTQA
IVWEWKAATG IPAKDVAWFS NISEGKLVYS GKYMLITASG GGVALVRISD KATVFYCYVG
GNTHSAEILP DGNIVTASST GKLLTLIHVN LNSFPDNVYK KTMVLDDAHN VVWDKQRQIL
WSANKDKLVA YTYNFNCNAP DLTVKESINL PASGCHDLFP VYGEDALWVS TSTKAWKVDL
KTRNIKESSA LPRIKSVDSG PEGYPVITLQ GIDTDQQWYN DKVQDLNGKT IFQMAGLKMY
KARWDLKNDF SYSANDDIKT CN
|
|---|
| |