Gene Phep_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0544 
Symbol 
ID8251631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp649778 
End bp650770 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content45% 
IMG OID644934194 
Producthypothetical protein 
Protein accessionYP_003090830 
Protein GI255530458 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000261261 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAG CACTTAAGGT TCTTATTGCA GTCATTTTAA TAGGCGCAAT CATTTATTTA 
TCAGGCCCAA GGCCACAGCA CCCCATTTAC AATACCGATC TTCCGGCTGT TCCGGAAATT
GCCCGGCTTG ACGATTATGT CAGGCAACTG GAGTCGAAAC ATAAAATAAA ACCAGGTAAT
GAGGCCGAGA TCGTTTGGGC AGACAGCAGC TTAAAACAGC AATCTGAATA TGCCGTCGTA
TATCTGCACG GTTATACTGC TTCTAAGGAA GAAGGAAACC CTGTACACTA CCACCTGGCC
AAAAACATTC ATGCCAACCT GTACCTTGCA CGACTTGCCG ACCATGGTAT TGATACCGTT
GCCGCAATGG AATATTCGAC AGCAGACCGG CTTTGGGGAA GTGCCAAACA GGCCTACGAA
ATAGGAAAAC AGCTAGGCAA AAAAGTTATT CTTGTAGGCA CATCTACTGG GGGGACTTTG
GCGCTTAAGC TTGCAGCGAC TTATCCCGAG GTATATAGCC TCATCCTGAT CTCGCCCAAT
GTCAGGATAA ATGACAACCT GGCCTTTATG CTCAATAATC CCTGGGGGCT ACAGATTGCC
AGGATAGTAA TTGGAGGCAA GGAAAGGACT TCGGAAGAGA AAAAACCCGA ATATGCAAAA
TACTGGTACA CCAGCTACCG TTTAGAGTCG GCAGTACAGC TACAGGAACT GGTAGAGACC
AGCATGAACA AGGCAACCTT TGAAAAAGTA AAGCAGCCCA CATTGTTATT GTATTATTAT
AAAAATGAAG AAGAGCAGGA TAAAACCGTT AAGGTAAGTG CTGAACTCTG GATGTTCGAC
CAGCTAGGCA CCCCTGCTCG ATTAAAAACA AAGGTAGCTA TCCCGAATGG AGGAGATCAT
GTTTTAGGCT CTTACATTAC CTCGAAAGAT ATCCCTGGGG TAGAAGGGGC GATAGATGGC
TTTGTACACA ATACCTTGAA GATAAAACCT TAA
 
Protein sequence
MKKALKVLIA VILIGAIIYL SGPRPQHPIY NTDLPAVPEI ARLDDYVRQL ESKHKIKPGN 
EAEIVWADSS LKQQSEYAVV YLHGYTASKE EGNPVHYHLA KNIHANLYLA RLADHGIDTV
AAMEYSTADR LWGSAKQAYE IGKQLGKKVI LVGTSTGGTL ALKLAATYPE VYSLILISPN
VRINDNLAFM LNNPWGLQIA RIVIGGKERT SEEKKPEYAK YWYTSYRLES AVQLQELVET
SMNKATFEKV KQPTLLLYYY KNEEEQDKTV KVSAELWMFD QLGTPARLKT KVAIPNGGDH
VLGSYITSKD IPGVEGAIDG FVHNTLKIKP