Gene Phep_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0538 
Symbol 
ID8251625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp643729 
End bp644148 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content40% 
IMG OID644934188 
ProductNucleoside-diphosphate kinase 
Protein accessionYP_003090824 
Protein GI255530452 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000118128 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTACAA ACAGAACATT TACCATGATT AAGCCTGATG CTGTTGCTAA TGGCCATATT 
GGTGCTATAA TCAATGACAT TACTACTGCC GGCTTTAAGA TAATTGCATT AAAGTACACT
AAATTAACGC CAGAGTATGC TGGTGAATTT TATGCTGTTC ACAAGGAACG CCCTTTTTAT
GCAGATCTGG TAAGCTTCAT GTCATCGGGT CCTATTGTGG CTGCCATTCT TGAAAAGGAC
AATGCAATTG AAGATTTCAG AAAACTGATC GGTGCTACCA ATCCCGCTGA AGCCGCTGAA
GGTACCATTC GTCAGAAATA TGCTAAATCC ATCGACGCAA ATGCGGTACA TGGTTCAGAT
TCTGATGAAA ATGCACAAAT TGAAGGAGAC TTCTTTTTTA CTGCTGCAGA ACGTTTTTAA
 
Protein sequence
MSTNRTFTMI KPDAVANGHI GAIINDITTA GFKIIALKYT KLTPEYAGEF YAVHKERPFY 
ADLVSFMSSG PIVAAILEKD NAIEDFRKLI GATNPAEAAE GTIRQKYAKS IDANAVHGSD
SDENAQIEGD FFFTAAERF