Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0538 |
Symbol | |
ID | 8251625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 643729 |
End bp | 644148 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644934188 |
Product | Nucleoside-diphosphate kinase |
Protein accession | YP_003090824 |
Protein GI | 255530452 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000118128 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTACAA ACAGAACATT TACCATGATT AAGCCTGATG CTGTTGCTAA TGGCCATATT GGTGCTATAA TCAATGACAT TACTACTGCC GGCTTTAAGA TAATTGCATT AAAGTACACT AAATTAACGC CAGAGTATGC TGGTGAATTT TATGCTGTTC ACAAGGAACG CCCTTTTTAT GCAGATCTGG TAAGCTTCAT GTCATCGGGT CCTATTGTGG CTGCCATTCT TGAAAAGGAC AATGCAATTG AAGATTTCAG AAAACTGATC GGTGCTACCA ATCCCGCTGA AGCCGCTGAA GGTACCATTC GTCAGAAATA TGCTAAATCC ATCGACGCAA ATGCGGTACA TGGTTCAGAT TCTGATGAAA ATGCACAAAT TGAAGGAGAC TTCTTTTTTA CTGCTGCAGA ACGTTTTTAA
|
Protein sequence | MSTNRTFTMI KPDAVANGHI GAIINDITTA GFKIIALKYT KLTPEYAGEF YAVHKERPFY ADLVSFMSSG PIVAAILEKD NAIEDFRKLI GATNPAEAAE GTIRQKYAKS IDANAVHGSD SDENAQIEGD FFFTAAERF
|
| |