| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0521 |
|---|
| Symbol | |
|---|
| ID | 8251608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 630969 |
|---|
| End bp | 632120 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644934171 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_003090807 |
|---|
| Protein GI | 255530435 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000118982 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATCATA CATCAGTAAT AACATTGTTA AATCCTAACA GACTGGTTTT TGGAACAAAT
TGTTTTGATC AGTTTATACA AGACTATCTG GAACTGGGCC TGAAAAGGCT ATTTGTTTTA
AGTTTCACTG GTCTGGAAGG GCAGCTGGCA AAGAAAATGG AAAAACTGGA TGCTGCCGGA
ATAGTGATTA AACAAAATAC TTCCATTGCC AAAGAGCCTT CTTTTGAGGA TTTTGAGGAA
ATTCTGGAAG AAGCAAGGGC TTTTAAAGCG GACAGTGTAG TGGGAATAGG CGGGGGAAGC
ATATTGGATG TAGCTAAACT GGTAGCTGCA CAACTGTTAA ACACACAAAG TACCACAACT
GTTATAGGAA AAGGAAATCT GGCAGAAAGA GCAACCTATT TAGCCTGCAT CCCTACCACA
TCGGGTACAG GAAGTGAGGT TTCGCCCAAT GCCATCTTTG TAGATGCAAA TGGAAATAAA
GTTGGTGTAA TCAGTCCTTT CTTAGTCCCT GACGCAGCTT ATATTGATCC GGTACTAACT
GTTTCTGTTC CGAAAGCGAT TACGGCCGCA ACCGGAATTG ATGCCCTGAC ACATTGCCTG
GAAGCTTATG CCAATAAATT TTCGCATCCG GTAACCGATT TGATTGCCCT GGAAGGGATA
AGCTTAGTGG CTAAATACCT GAAAAGGGCA TGTGATGACG GGACAGATCT TGAGGCAAGG
TCGCAGGTTG CCCTGGGCAG CATGTACGGT GGAATGTGTC TGGGCCCGGT TAATACCGCT
GCTGTTCATG CACTTGCTTA TCCGCTCGGG GTGAAATTCC ATATCAATCA CGGCTTATCT
ATAGCGCTTT TACTCCCGGC AGTTATGGAG TTTACCCTTT CCGCTGCACC GGAACGCTAT
TCGGCGATCG CTATAGCACT CGGTGCTGAA CCTAAAAGTA CAGCCCTGGA AACGGCAAGA
GCTGGGGTAG AGTTACTGAA AAGACTGATC CGGGACTGCG GTTTACCAGC TTCACTTGCT
GAGGTAAATG TGCCGTTCAG CGCCATTGAG GCCATGGCTA TAGATGCCGT TAAAATAGAG
CGGCTACTGA AAAATAATTT AAGAGAAGTG GCATTGGAAG ATGCAAAAGA AATTTACAAA
TCGGCATTTT AA
|
|---|
| Protein sequence | MHHTSVITLL NPNRLVFGTN CFDQFIQDYL ELGLKRLFVL SFTGLEGQLA KKMEKLDAAG
IVIKQNTSIA KEPSFEDFEE ILEEARAFKA DSVVGIGGGS ILDVAKLVAA QLLNTQSTTT
VIGKGNLAER ATYLACIPTT SGTGSEVSPN AIFVDANGNK VGVISPFLVP DAAYIDPVLT
VSVPKAITAA TGIDALTHCL EAYANKFSHP VTDLIALEGI SLVAKYLKRA CDDGTDLEAR
SQVALGSMYG GMCLGPVNTA AVHALAYPLG VKFHINHGLS IALLLPAVME FTLSAAPERY
SAIAIALGAE PKSTALETAR AGVELLKRLI RDCGLPASLA EVNVPFSAIE AMAIDAVKIE
RLLKNNLREV ALEDAKEIYK SAF
|
|---|
| |