| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0520 |
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| Symbol | |
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| ID | 8251607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 629930 |
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| End bp | 630946 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934170 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003090806 |
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| Protein GI | 255530434 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.532617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000174135 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAAGTC TAAAAAATGT AGCCGATCTG GCAGGTGTTT CTGTGGCCAC TGTATCCAGG
GTTTTAAATT CAGATGAAGT GGTTAAGTAT GAGACTAAGG TGAAGGTGAT GAATGCGATA
AAAACACTGA AATATTCGCC CAATCGGGTT GCCCAGCGTT TGCGTACCAC CAGGAAAAGC
AGCAGGTTAA TTGGTTTGCT AATCCCTGAT ATCCAAAACC CTTTTTATGT AGATGTGATC
AGGGGGATAG AGGTTTTTGC TTATGCAAAT AATGCCGCTG TGGTGATTGG TAACTTCTCT
CAGGATGAAA AAAAGGAAAA GCTCTACCTG GATATCCTAA AATCAGAATC GGTAGATGGT
TTTATTGTAG CGCCTTCAAA TGAAAAGGAC ATTTACATTA AAGAGCTGGT GAAAGATGGG
TTCCCTGTTG TTTGCATTGA CCGTGGGCTT AGCGATATTG AAGTTGACCT GGTGAAAGTG
GATAACCAAA AGGGCGCCTT TAATGCCATT GAACATTTAA TTAAATTACA ACATACACGG
ATCGGGCACA TTACGGGAAA TCAGCTGATA CCGACAACAA TGGAGCGTTT GGCAGGTTAT
GAACAGGCAT TGAAGCAATA CAACATTGCT ATAGATCCTG AAATTATTGT AAGCAGGGAA
TCAGATTATG AAAGTGGTGC TGAGCTGGCC GCTTATCTGC TGGACCTGGA AAATCCCCCG
ACCGCTATTT TTACAGGGAA TAACCTGCTC ACACTGGGCG CTTTGGAAAC CATTAATAAA
AGAGGTTTAA AAATTCCGGA GGATATAGCC ATCATCGGAT TTGATGATGT TTATTGGGCA
AATTCTTTAA ATCCGCCCCT CACGGCGGTC AGACAGCCGG GTTTTGAGAT CGGCAAACGT
GCAATGGAAT TGCTGATCCA GAGGATTCTC TCGCCGGAGC GCGAAGTGGC CAGTATCATT
TATAAAACGG AACTCATGAT CAGGAAATCC TGTGGAAGTA AAGAAAAACG ACTGTAA
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| Protein sequence | MSSLKNVADL AGVSVATVSR VLNSDEVVKY ETKVKVMNAI KTLKYSPNRV AQRLRTTRKS
SRLIGLLIPD IQNPFYVDVI RGIEVFAYAN NAAVVIGNFS QDEKKEKLYL DILKSESVDG
FIVAPSNEKD IYIKELVKDG FPVVCIDRGL SDIEVDLVKV DNQKGAFNAI EHLIKLQHTR
IGHITGNQLI PTTMERLAGY EQALKQYNIA IDPEIIVSRE SDYESGAELA AYLLDLENPP
TAIFTGNNLL TLGALETINK RGLKIPEDIA IIGFDDVYWA NSLNPPLTAV RQPGFEIGKR
AMELLIQRIL SPEREVASII YKTELMIRKS CGSKEKRL
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