Gene Phep_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0488 
Symbol 
ID8251575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp583677 
End bp584639 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content46% 
IMG OID644934138 
ProductATPase associated with various cellular activities AAA_3 
Protein accessionYP_003090774 
Protein GI255530402 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTG ACAATGACAT TAAAGCCGTT GATGCCCTGC ATCAGTCGTA CAACAACATT 
AAAGCCGAAA TAGGAAAGGT TGTTATTGGC CAGGATGACA TCATTAAATC AGTACTGATA
TCCATATTTA GCAATGGCCA TTGTTTACTG GTTGGTGTTC CCGGGCTGGC TAAAACGTTA
TTGGTTCAAA CCGTAGCAAA TGTGCTGGAC CTGAACTTCA ACAGGATCCA GTTTACACCC
GATCTGATGC CCAGTGATAT TATCGGGGCT GAAATACTGG GTGAGGACCG GAATTTTAAA
TTCATCAACG GACCGGTATT TTCGAACATC ATCCTTGCGG ATGAGATCAA CAGGACACCC
CCAAAAACCC AGGCTGCCTT ACTGGAGGCC ATGCAGGAAA AAGCGGTAAC CGCTGCGGGC
CTGAGACATG TATTGCCCAA CCCTTTCTTT GTACTGGCTA CCCAGAACCC GATTGAGCAG
GAAGGCACTT ACCCCCTGCC TGAAGCACAG CTGGACAGGT TTATGTTTAA TGTACATTTA
AGCTACCCCA GTTTTGCCGA TGAGCTGACC ATTGTAAAAA ATACCACCAG CAATAATGAA
GTTAGCTTAA ACAAGATCAT TAATGCCAGT CAGATCCAGT TCTTTCAGAA GCTGATCAGG
AATATTCCGG TAACAGACAA TGTAGTGGAG TATGCAGTAA AACTGGTAAG CAAAACCCGT
CCGGGTACCA GCTTATCAAC CGAAGAGGTA AATAAATACA TCAACTGGGG TGCCGGTCCA
AGGGCTTCGC AGTTTTTGGT GATTGGCGCA AAATGCCATG CCGCAATCTC GGGTAAATAT
GCACCAGATA TAGAAGATGT ACAGGCGGTG GCCGAAGCCA TTTTACGCCA TAGGATAGTG
CGCAACTACC GTGCAGAGGC CGAAGGCCTG TCGGTAGAGC ACATCATTAA AAATCTTTAC
TAA
 
Protein sequence
MQFDNDIKAV DALHQSYNNI KAEIGKVVIG QDDIIKSVLI SIFSNGHCLL VGVPGLAKTL 
LVQTVANVLD LNFNRIQFTP DLMPSDIIGA EILGEDRNFK FINGPVFSNI ILADEINRTP
PKTQAALLEA MQEKAVTAAG LRHVLPNPFF VLATQNPIEQ EGTYPLPEAQ LDRFMFNVHL
SYPSFADELT IVKNTTSNNE VSLNKIINAS QIQFFQKLIR NIPVTDNVVE YAVKLVSKTR
PGTSLSTEEV NKYINWGAGP RASQFLVIGA KCHAAISGKY APDIEDVQAV AEAILRHRIV
RNYRAEAEGL SVEHIIKNLY