| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0485 |
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| Symbol | |
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| ID | 8251572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 580288 |
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| End bp | 581748 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934135 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_003090771 |
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| Protein GI | 255530399 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAG GCTTACACCT GTACAATACA CTTACACGAA CAAAAGAACT TTTTGAACCG
CTGCACGCGC CTAATGTAGG CATGTATGTT TGTGGACCAA CCGTATACAG CGACGTTCAT
TTGGGCAATT GCCGTACCTT TATCTCCTTC GATTTGATAT TCAGATATTT AAAATACAGC
GGATATAAAG TACGCTATGT GCGCAACATT ACAGATGCCG GACATTTGGA AGGTGACCGT
GATGAAGGGG ATGATAAATT TGCAAAAAGG GCCAAGCTGG AGCAGCTGGA ACCTATGGAA
ATTGTACAAA AGTATACCCT TGGTTTTCAC GATGTGCTGC GGATGTTTAA TACCCTGCCG
CCAAGTATAG AACCCACTGC AACCGGACAT ATCATTGAAC AGATAGAAAT GATCAAGGTG
ATAATGGACA ATGGTTATGC CTATGAAGCC AATGGAACGG TTTATTTTGA CGTAGAAAAG
TACAGTGCCA GTTACAACTA TACCATATTG ACCAACCGTA ACCTGGAAGA TATGCTGGCC
AATACCCGGG AACTGGGCGG ACAGGACGAG AAACGCGGTC GCCTTGATTT TGCACTGTGG
ATAAAAGCCA AGCCCGAAAC CATTATGCGC TGGCCATCTC CGTGGGGTAT AGGTTTCCCG
GGCTGGCATA TAGAATGCTC GGCCATGAGT GCCAAATACC TTGGTGAAGA GTTTGATATC
CATGGTGGTG GTATGGATCT GGCCGCTACG CATCATACCA ACGAAATAGC CCAGTCGGAA
GCCTGCAACC ACAAACAACC GGCAAAATAC TGGATGCATA CCAATATGCT TACCGTTAAT
GGTGCCCGCA TGTCTAAGTC GGCAGGCAAT GGCTTTTTGC CAGGCGAACT TTTTACTGGC
GACCATCCGC TGCTCGATAG GGGATACAGT CCTATGACCG TTAAGTTCTT TATGCTTCAG
GCACATTACC GCAGTACACT CGATTTTTCC AATGAAGCAT TGGATGCCTC TGAAAAAGGC
TTCAGACGAT TAATGAACGC CGTAACCCTA CTCGATAAAC TGGTTCCTGC TGCAGAAAGT
GATTTTGAAA TAGATCCGAT AGCCAGCAAT TGCATCAGGG CTATGAACGA TGATTTCAAT
AGCCCTGTGG TCATTGCCGA ACTGTTTGAA GCTACCCGCA TCATCAATAT TGTATACGAT
GGTAAAGGAA AGATCTCTGT TGCAGAACTC GGTAAGCTGA AAAAGCTGGT AAAGGATTTT
GTATTCGATA TTTTTGGCCT GAAAGATGAA GAAGCATCCA ATACCGAGTT AAATGATGTA
CTGGAAATGA TGATCGACAT CAGGAAGGCG GCAAAAGAAA ATAAAGATTA TGCCACCTCT
GATAAAATCC GCGTTGGCCT GCAAAGTATG GGCATTCAGC TTAAAGACAG TAAAGAAGGC
ACCACCTGGA ACAAAGTGTA G
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| Protein sequence | MDKGLHLYNT LTRTKELFEP LHAPNVGMYV CGPTVYSDVH LGNCRTFISF DLIFRYLKYS
GYKVRYVRNI TDAGHLEGDR DEGDDKFAKR AKLEQLEPME IVQKYTLGFH DVLRMFNTLP
PSIEPTATGH IIEQIEMIKV IMDNGYAYEA NGTVYFDVEK YSASYNYTIL TNRNLEDMLA
NTRELGGQDE KRGRLDFALW IKAKPETIMR WPSPWGIGFP GWHIECSAMS AKYLGEEFDI
HGGGMDLAAT HHTNEIAQSE ACNHKQPAKY WMHTNMLTVN GARMSKSAGN GFLPGELFTG
DHPLLDRGYS PMTVKFFMLQ AHYRSTLDFS NEALDASEKG FRRLMNAVTL LDKLVPAAES
DFEIDPIASN CIRAMNDDFN SPVVIAELFE ATRIINIVYD GKGKISVAEL GKLKKLVKDF
VFDIFGLKDE EASNTELNDV LEMMIDIRKA AKENKDYATS DKIRVGLQSM GIQLKDSKEG
TTWNKV
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