Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0463 |
Symbol | |
ID | 8251550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 549402 |
End bp | 550064 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934113 |
Product | iron dependent repressor |
Protein accession | YP_003090749 |
Protein GI | 255530377 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATCCT ATACTGAAGA AAACTATTTA AAGGCCCTGT TGATGTTGAG TTTCCAGAAC GAAGAACGAC CGGAAGCAGG TACGAACGAA ATGGCGGCGC ACCTGGGCGT AAAACCAGCC ACAGCTACCG ATATGCTAAA AAAGCTGAAA GAAAAGGAGC TGGTAAGCTA TCAGAAATAC GGAAAGATAT TGCTGACAGA ACTGGGCAGA AATAAAGGTA TTGCCATATT GAGGAAACAC CGGCTCTGGG AAACCTTTCT GTATGAAAAA CTGGATTTTA GCTGGGATGA GGTACATGAA GTAGCCGAAC AACTGGAACA TATCCACTCG GCCAAACTGG TAGACAAACT CGAAGAGTTC CTGAATTTTC CTGAATTCGA TCCTCACGGA GACCCTATTC CGAAGGCTAA CGGAGATATC CCTATAGTGG ACAAGATTTT ACTTGCAGAA GTAAGGGCCG GAGAAACCTG CAAAGTTGTA GCCGTTAAAG ATACCTCCGT TCTTTTTTTA CAGTACCTGG AAAAACTAAA GATCACCATA GGCACAAAAA TAAAAGTACT GGAAGTGATA GATTTTGATG GTTCATTGAA CATACAGATT GAAAAAGAAG AATCCAGAAG TGTATCTATG AAATTTGGCG AAAGCCTTTT TGTAAAGAGA TAG
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Protein sequence | MLSYTEENYL KALLMLSFQN EERPEAGTNE MAAHLGVKPA TATDMLKKLK EKELVSYQKY GKILLTELGR NKGIAILRKH RLWETFLYEK LDFSWDEVHE VAEQLEHIHS AKLVDKLEEF LNFPEFDPHG DPIPKANGDI PIVDKILLAE VRAGETCKVV AVKDTSVLFL QYLEKLKITI GTKIKVLEVI DFDGSLNIQI EKEESRSVSM KFGESLFVKR
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