Gene Phep_0463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0463 
Symbol 
ID8251550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp549402 
End bp550064 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content42% 
IMG OID644934113 
Productiron dependent repressor 
Protein accessionYP_003090749 
Protein GI255530377 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATCCT ATACTGAAGA AAACTATTTA AAGGCCCTGT TGATGTTGAG TTTCCAGAAC 
GAAGAACGAC CGGAAGCAGG TACGAACGAA ATGGCGGCGC ACCTGGGCGT AAAACCAGCC
ACAGCTACCG ATATGCTAAA AAAGCTGAAA GAAAAGGAGC TGGTAAGCTA TCAGAAATAC
GGAAAGATAT TGCTGACAGA ACTGGGCAGA AATAAAGGTA TTGCCATATT GAGGAAACAC
CGGCTCTGGG AAACCTTTCT GTATGAAAAA CTGGATTTTA GCTGGGATGA GGTACATGAA
GTAGCCGAAC AACTGGAACA TATCCACTCG GCCAAACTGG TAGACAAACT CGAAGAGTTC
CTGAATTTTC CTGAATTCGA TCCTCACGGA GACCCTATTC CGAAGGCTAA CGGAGATATC
CCTATAGTGG ACAAGATTTT ACTTGCAGAA GTAAGGGCCG GAGAAACCTG CAAAGTTGTA
GCCGTTAAAG ATACCTCCGT TCTTTTTTTA CAGTACCTGG AAAAACTAAA GATCACCATA
GGCACAAAAA TAAAAGTACT GGAAGTGATA GATTTTGATG GTTCATTGAA CATACAGATT
GAAAAAGAAG AATCCAGAAG TGTATCTATG AAATTTGGCG AAAGCCTTTT TGTAAAGAGA
TAG
 
Protein sequence
MLSYTEENYL KALLMLSFQN EERPEAGTNE MAAHLGVKPA TATDMLKKLK EKELVSYQKY 
GKILLTELGR NKGIAILRKH RLWETFLYEK LDFSWDEVHE VAEQLEHIHS AKLVDKLEEF
LNFPEFDPHG DPIPKANGDI PIVDKILLAE VRAGETCKVV AVKDTSVLFL QYLEKLKITI
GTKIKVLEVI DFDGSLNIQI EKEESRSVSM KFGESLFVKR