| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0458 |
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| Symbol | |
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| ID | 8251543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 544652 |
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| End bp | 545563 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644934106 |
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| Product | Endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_003090744 |
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| Protein GI | 255530372 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3568] Metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.471158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTTCAA GAAGAAATTT TATCAGGGCT GCCGGCCTGC TTGCTGCCAG CCCTGCAATA
AGCAGGCTCG GCTATGCCGC TAAACCTTTG CTGCCGGCCA TTGCTGCCGG AAAGCATAAA
ATGCTGACCT GCAACATCCG GGTCGATCTG CCTGAAGATG AGCAGGCAGG TTTTGGCTGG
AATGGCCGTA AAGAGATTTG TGCCGCAATT ATGCTGCAGC AAAAGCCCGA TATCATTTGC
ATGCAGGAAG TATTGCGAAA CCAGAATGAG GACCTAAAAA AGGCATTGAA AGGCTATTTT
TCCTTTGGCT TTGAAGGCCC GGAAATGGAT GCCTTTACAA CCGGGTATCA TGGCATAGCC
AAAAATCCCA TCTTCTTTTC AGAAAAAAGA TATGAACTGC TCTCGGCTGG TGGTTACTGG
TTGTCTGAAA CCCCACTTAT GGCCGGCAGT TTATCCTGGG ATTCTGCCAG GGCCAGGAAT
GCCAACTGGG TAAGGCTGAA GGACAGGCAA TCGGGCAAAG ATTTCAGGGT AGTCAATCTG
CACCTGGACC ATAAAAGCCA GCCGGCCAGA GAGAAACAAA TGGAGATGGT GCTCGCAGAT
GCAGCGCAAT ACCCAAGGGA TTACCCCCAG CTGCTGGCAG GTGATTTTAA TGCATCTGCC
GAAAATAAGG TTTATGAGCT GGTGATATCA GCGAAATGGA AAGATATCTA TACCACCTTG
CATGGGGAAG CAGAACCCGG ATATACTGTT CATCAGTTTC AGGGTGAAAA CTATTCAAAA
AAAGGAAAGA AGATAGATTT CATTTTTTGC AAGGGGGAGG TAACCGCTCA ATCGGCAGGA
ATTTTAAAGG ATAACGTTAA AGGTAAGTAT CCAAGCGATC ATTATTTTGT ATCTGCTGAA
GTGATGATCT GA
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| Protein sequence | MVSRRNFIRA AGLLAASPAI SRLGYAAKPL LPAIAAGKHK MLTCNIRVDL PEDEQAGFGW
NGRKEICAAI MLQQKPDIIC MQEVLRNQNE DLKKALKGYF SFGFEGPEMD AFTTGYHGIA
KNPIFFSEKR YELLSAGGYW LSETPLMAGS LSWDSARARN ANWVRLKDRQ SGKDFRVVNL
HLDHKSQPAR EKQMEMVLAD AAQYPRDYPQ LLAGDFNASA ENKVYELVIS AKWKDIYTTL
HGEAEPGYTV HQFQGENYSK KGKKIDFIFC KGEVTAQSAG ILKDNVKGKY PSDHYFVSAE
VMI
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