Gene Phep_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0395 
Symbol 
ID8251480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp468057 
End bp468605 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content37% 
IMG OID644934043 
ProductATP synthase F1, delta subunit 
Protein accessionYP_003090681 
Protein GI255530309 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.499791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA ATAAAGCAGC ATCGAGATAC GCCAAATCAT TAATTGATCT TTCAGAAGAG 
CGCAATGCCC TTGAAGAAAT TAAAAATGAT ATGGTTTTTT TAGAGCAGGT AATTGATCAC
AATCCTGAAC TGGAGGCTAT CCTTAAAAAT CCTATTGTCC CTTTGGATAA AAAAGCCGGG
ATTCTGGAGG ATGTGTTTGG CGCAAAGGTC AACGAAGTTA CTAGAGCTTT TTTTAAGCTA
ATGGTAAGTA AAGGCCGTTC TGCAATTCTA TTTGACACAT CAAAAGCTTT TGTTGCACAA
TATAATGCAC TTAAAGGAAT TGTAACTGCT TATGTAACCA GCGCTACTGA ACTTACTGCT
GAAAGCAGGG CCGAAATTAT AGCAATCGTT AAAAAAGAAA TCGGTGCCAA TGAGGTTGTG
ATTAAGGAAA AAGTGAATGA CAAACTGATA GGTGGCTTTA TTTTAAAAGT GGGTGACAGG
CAATTTGATG CCAGCATAGC CAGCAGTTTA AGTAAACTTA AAAAAGAATT TGCCCAGGGT
GTTGTTTAA
 
Protein sequence
MSENKAASRY AKSLIDLSEE RNALEEIKND MVFLEQVIDH NPELEAILKN PIVPLDKKAG 
ILEDVFGAKV NEVTRAFFKL MVSKGRSAIL FDTSKAFVAQ YNALKGIVTA YVTSATELTA
ESRAEIIAIV KKEIGANEVV IKEKVNDKLI GGFILKVGDR QFDASIASSL SKLKKEFAQG
VV