| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0387 |
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| Symbol | |
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| ID | 8251472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 458472 |
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| End bp | 460268 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644934035 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003090673 |
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| Protein GI | 255530301 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.971851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTT TCGATCATAA AAAGGCCCTG ACCAACATAC CACATAAACC TGGTATTTAC
CAGTACTGGG ATGCAGAAGG TACGCTTATT TATATCGGTA AAGCTAAAGA TCTACGAAAC
CGGGTAGGCT CCTATTTCAA CAAAGACAAT CAGATGAACG GAAAAACCAG GGTACTGGTT
TCCCGGATCC GTAAAATTAC CTTTACCATT GTTGATACAG AAATAGACGC CTGGCTACTG
GAAAACAGTC TGATCAAAAA GCATCAGCCA AGATATAACA TCCTGCTCAA AGATGATAAA
ACCTATCCCT GGATCATCAT TAAAAAAGAA CCTTTCCCCA GGGTATACTG GACAAGGAAA
ATGATAAAAG ACGGATCAAC TTATTTTGGC CCTTATGCTT CTGTTGGTAT GATGCACACC
ATCATCGACC TTATTAAAGA AACCTATCCC TTAAGAACCT GTAACCTGCC ACTCAGCAAA
AAAAATATTG ACGATGGTAA ATTCAAGGTA TGCCTTGAAT ACCAGATCGG GAACTGCAAA
GGGCCATGTC AGGCCTATCA GACCGAACCC GATTACGATT CAAATATTGA AGAGATCAAA
GATATTCTCA ATGGAAAAAT CGGCAATGTC ATTAAAGACG TAAAACGGGT TATTAAAAAG
TCAGTAGATG AATTAAATTT TGAACTAGCC CACCAGTACC AGCGTAAATT GATGGTATTA
GAAAAATACC AGAGCAAATC AACGGTAGTA AACAGTGCCA TCACCAATGT AGATGTAGTT
AGTATCGCTT CTGATGAACG TTACGCTTTT GTGAATTACC TTAAAGTAAT GAACGGAAGT
ATCATTCAAA CACAAACCAT TGAGATTAAG AAACGCCTGG ATGAAACTGA TGAAGAGCTT
CTTACTATTG CCATAATGGA ATTCCGCACC AGGTTTAATA GTACCTCAAA AGAGATCATT
GTCCCTTTTG ACATTACATT AACGGATGAA AATCTTAAGT TTACTTTACC CAAACTGGGG
GAAAAGAAAA AACTGCTTGA ACTCTCACAG AAAAACGTAT TGTTCTTTAA AAAAGAGAAG
CTAAACCAGT ACGAGAAATT AAATCCTGAT CTGAGAACAG ACCGGATCCT TAGTCAGATG
CAGAAAGACC TTGGGCTTAC AAAAAGCCCC AAACACATCG AATGCTTTGA CAATTCCAAC
TTCCAGGGCA AGTACCCGGT TTCTGCCATT GTTGTTTTTA AGGACGCCAA ACCTTCTAAA
AAAGATTACA GGCATTTCAA TGTGAAAACA GTAGAAGGAC CAAATGATTT TGCCACCATG
GAAGAGGCTG TTTACAGGCG TTATAAGCGC ATGCTGGAAG AAGAGAACAC CTTACCTGAA
CTCATCATCA TTGATGGAGG TAAGGGCCAG CTTTCCTCTG CCATGAACAG TTTAAAGAAA
CTGGGCATAG AAAAACGGGT TACTGTAATC GGAATAGCTA AAAGATTGGA AGAATTGTTT
TTCCCCGGTG ATCCATATCC TTTATACCTG GATAAAAAAT CGGAAACCTT AAAAGTAATT
CAGCAGCTAC GCGATGAGGC TCACCGCTTT GGTATCACCT TCCACCGAAA AAAGAGAGAT
CAGGGCACAC TGAAAACAGA ATTGGAACAA ATTCCCGGCA TTGGTAAAAC CACTGCCGAT
AAACTACTCA GGCATTTCAA ATCTGTTAAA AAAATAAAAG AGGCTAAAGA AGAAGAGTTA
ACTATGGTAC TTAATAAAAC TCAGGTAAAA ACCCTTTTAG ATTACTTTAC AAGATAA
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| Protein sequence | MSAFDHKKAL TNIPHKPGIY QYWDAEGTLI YIGKAKDLRN RVGSYFNKDN QMNGKTRVLV
SRIRKITFTI VDTEIDAWLL ENSLIKKHQP RYNILLKDDK TYPWIIIKKE PFPRVYWTRK
MIKDGSTYFG PYASVGMMHT IIDLIKETYP LRTCNLPLSK KNIDDGKFKV CLEYQIGNCK
GPCQAYQTEP DYDSNIEEIK DILNGKIGNV IKDVKRVIKK SVDELNFELA HQYQRKLMVL
EKYQSKSTVV NSAITNVDVV SIASDERYAF VNYLKVMNGS IIQTQTIEIK KRLDETDEEL
LTIAIMEFRT RFNSTSKEII VPFDITLTDE NLKFTLPKLG EKKKLLELSQ KNVLFFKKEK
LNQYEKLNPD LRTDRILSQM QKDLGLTKSP KHIECFDNSN FQGKYPVSAI VVFKDAKPSK
KDYRHFNVKT VEGPNDFATM EEAVYRRYKR MLEEENTLPE LIIIDGGKGQ LSSAMNSLKK
LGIEKRVTVI GIAKRLEELF FPGDPYPLYL DKKSETLKVI QQLRDEAHRF GITFHRKKRD
QGTLKTELEQ IPGIGKTTAD KLLRHFKSVK KIKEAKEEEL TMVLNKTQVK TLLDYFTR
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