Gene Phep_0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0383 
Symbol 
ID8251468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp453718 
End bp455085 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content43% 
IMG OID644934031 
Productprotein of unknown function DUF323 
Protein accessionYP_003090669 
Protein GI255530297 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03525] gliding motility-associated lipoprotein GldK 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACG TATACTTTGT TGCTTTTATT ACTATCGCTG CATTATTTTC GAGTTGTGGA 
AAAGGAGGAC AGGGGGAGTT GGTTGGAGTT TATAATAGGA AATTCAGGAA CAACAGAATC
CCTTTGGGAA TGGTATATAT CCCGCCTGGA AGGACTTTAA TTGGGATGTC TGATGAGGAT
ATTAACAATA CGCAAAGCTC TCCTGCCAGG ATGACTTCTT TTAGTGCTTT TTTTATGGAT
CAGACTGAAA TTACAAATGC TGAATACAGG CAGTTTGTAT ATTGGGTGAG AGATTCCGTT
GCGGTAACTT CGTTAGGCCC GTCTGGGGCT CCTACATATT TTAAACCGGC ACCTACGGGA
CCAGGTGGTG GGGCTGCCCT GGGTGCAAAC AGAAATATAG ACTGGAGAAA GATCGGTAAT
GGGTCTGCAC TGTGGAGCAA AAAAAATAAT GGATTAGGGA ATAAGCTGAC CGATATGTAT
TATAGTGGTG CAGATGCCCT GCCTGGGAGA GATGAGATTG ACATCAGGAA ATTAAGGTAT
GCTTACAGTT ATGTAAGCTC CGATCTTGCC GTTGAGGGCA GGAAGGACCC ATCCAAAAAG
AGACAGGATT TTATCATTAC TTATACGGAC AATCCAGATC CAAGTAATCC AAACCATCAT
CCTTCTGTTC CTGTTTATCC TGATACTTTG GTGTGGAAAG TGGACTACTC TTATTCTCAG
AATGATCCAA TGGTTAAAAC CTATTTTAAC CATCCATCAT ATGATGACTA TCCGGTTGTT
GGGGTAACCT GGGAACAGGC CAGTGCTTTT TGCGTATGGC GTACCCGTTT TTATGAATCG
GTTGCTGTAT CCAGGAAACA GCCGATTAAT GCCAGACCAG AATATCAACT GCCAAGTGAG
GCTCAGTTTG AATACGCCGC CAGGGGAGGT AATGTAAAAA CCAAATACCC ATGGGGTGGC
CCTTATGTAC GCAATACAAA AGGATGTATG CAGGCAAACT TTAAGGTTGG CCGTGGAAAT
TATTCAGATG ATGGTGGACT GTACACGGTA AACGTAAAGT CTTATTTTCC TAACGATTAT
GGTCTTTATA ATATGGCTGG TAATGTTTCG GAATGGACAA TAACAGCCTA CAACCAATCT
GCAGCCCCTA TGCTGCTTGA TTTTAACCCT AACTTTACTT ATGTAGCCAA AACCGGTGAC
AGTAAATACA TGAAACGTAA AGTAGTAAGG GGCGGATCAT GGAAAGATAT TGGCTTCTTC
CTCCAAAATT CAGTGGGTAC TTATGAGTAC CAGGACCAGG CCAGATCTTA TATAGGCTTC
AGGTGTGTTT CTGCATATCC TGGAACTGAC ATCACTTACA GAAACTAA
 
Protein sequence
MRNVYFVAFI TIAALFSSCG KGGQGELVGV YNRKFRNNRI PLGMVYIPPG RTLIGMSDED 
INNTQSSPAR MTSFSAFFMD QTEITNAEYR QFVYWVRDSV AVTSLGPSGA PTYFKPAPTG
PGGGAALGAN RNIDWRKIGN GSALWSKKNN GLGNKLTDMY YSGADALPGR DEIDIRKLRY
AYSYVSSDLA VEGRKDPSKK RQDFIITYTD NPDPSNPNHH PSVPVYPDTL VWKVDYSYSQ
NDPMVKTYFN HPSYDDYPVV GVTWEQASAF CVWRTRFYES VAVSRKQPIN ARPEYQLPSE
AQFEYAARGG NVKTKYPWGG PYVRNTKGCM QANFKVGRGN YSDDGGLYTV NVKSYFPNDY
GLYNMAGNVS EWTITAYNQS AAPMLLDFNP NFTYVAKTGD SKYMKRKVVR GGSWKDIGFF
LQNSVGTYEY QDQARSYIGF RCVSAYPGTD ITYRN