| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0355 |
|---|
| Symbol | |
|---|
| ID | 8251440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 419284 |
|---|
| End bp | 420672 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644934003 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003090641 |
|---|
| Protein GI | 255530269 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000192984 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAC CAATTTTATT TTCAACGCTT TGCTGTGTTG TTTTTTTAAT TACTTCAGTA
TACGCACAAA AAACTGCTCT TGCTGAAGCG GCCGACTGGA AAGCTGGCGT TGCCAGGGTT
GTAATTACCC CAAAGCAGCC CATGGCAATG GCCGGCTTTG CCAGCCGTAA CCATCCTTCT
GAGGGTACCC TGCACGACTT ATGGGCCAAA GCACTTGCCC TGGAAGATGC CAATGGCAAA
AAGGCCTTAC TGATTACCAC CGACCTTTTA GGTTTTCCAA AAGATGTGTC TAACCACATC
AGGGACAGGA TTAAAAGCAA ATTTGGTTTA GACCGCGACC AGGTATTGCT GAACAGCTCA
CATACCCATT CGGGTCCGGT TTTACAGGAT GCGCTGACAG ACATTTACCT GCTGGATGCT
GTACAACTGG AAAAGATCAA GCAATATTCA CTTGCACTGG AAGACCAGAT TGTTAAACTT
GCAGGTGAGG CCCTGGGTAA AATGGAGCCT GCTGCACTTT ATGCACAAAA TGGGGTAACC
AGATTTGAGG TTAACCGTCG CAACAACCCT GTAGCTACTT TAACCAAGGT TACAGAATTG
AAGGGGCCAA GTGATTGGGC AGTTCCGGTA ATCAAAGTAG TGAATAAAAA AGGAGAGCTG
AAAGCCATTG CTTTTGGTTA TGCTTGTCAC AATACCGTTT TGGAACGCTA TGAATGGTCT
GGCGATTATG CCGGTTTTGC CCAGATAGAG GTTGAAAAAT ACCATCCGGG AACTACGGCC
ATGTTTTTTC AGGGTGCTGG TGCAGATCAG AACCCCCTGC CTCGCGGTAC TGTACCTCTG
GCCAAACAAT ATGGCCGGGA ACTGGCAGCT GCGGTTGACC GTGTAATTGA AGAGGACATG
CGGAAATTAC CTGCTACCCT GTCTACCGCC TATTCGGAAA TAAATTTGCC ATTGGGTGCT
GTTCCAAATA AAGAAGAGTT GACCCAAATT GCTAAAACAA CGCCGGTAGC TTATCAGAAA
CGCTGGGCCG AACGTATGAT CGGTAAGATA GATAAAGGAG AGCAACTGAT CCGCTCGTAC
CCATATCCTG TACAGGTGTG GTCAATTGGG GGTCAGGCCC TTGTAGCCTT AGGGGGCGAA
CTCACTGTAG AATATTCCAT TATCACTAAG CAGATGTTTG GCCAGGACGC CTTTGTTTTG
GGCTATAGCA ATGATGTGAT GACCTATATT CCTTCCTGTT CCATTTTACA GGAAGGCGGC
TATGAAGGTG ATGCTGCCAG AATGGTATAT GGTATGCCCG CAAAATGGGA TGTAACAGTT
GAAACCAGGA TTTTAAACGA AGTGATTTTG CAGGCCGAAA AAGCTGGCGT GCCAAAAATT
GTCAGATAA
|
|---|
| Protein sequence | MKRPILFSTL CCVVFLITSV YAQKTALAEA ADWKAGVARV VITPKQPMAM AGFASRNHPS
EGTLHDLWAK ALALEDANGK KALLITTDLL GFPKDVSNHI RDRIKSKFGL DRDQVLLNSS
HTHSGPVLQD ALTDIYLLDA VQLEKIKQYS LALEDQIVKL AGEALGKMEP AALYAQNGVT
RFEVNRRNNP VATLTKVTEL KGPSDWAVPV IKVVNKKGEL KAIAFGYACH NTVLERYEWS
GDYAGFAQIE VEKYHPGTTA MFFQGAGADQ NPLPRGTVPL AKQYGRELAA AVDRVIEEDM
RKLPATLSTA YSEINLPLGA VPNKEELTQI AKTTPVAYQK RWAERMIGKI DKGEQLIRSY
PYPVQVWSIG GQALVALGGE LTVEYSIITK QMFGQDAFVL GYSNDVMTYI PSCSILQEGG
YEGDAARMVY GMPAKWDVTV ETRILNEVIL QAEKAGVPKI VR
|
|---|
| |