Gene Phep_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0340 
Symbol 
ID8251425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp396853 
End bp397659 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content47% 
IMG OID644933988 
Productamidohydrolase 2 
Protein accessionYP_003090626 
Protein GI255530254 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTG ATATCAATGC GTATGTTGGC CACTGGCCAT TTCAGCAGCT TAAGTACAAT 
ACCTGCGAGG GGCTATTGGG CCGGATGAAT AAGTTTGGGG TCGATAGCTC TGTGATCAGC
AACCTGAATG GCATTTTTTA TAAAAATACA GCCTCCGCAA ATGAAGAACT ATACGATGAG
ATCAGGTCTA ACCGGAAGTT TGGCGATCGG TTTATCCCTT TCGGTGTCAT CAACCCCATC
TATGCCGGCT GGAAAGATGA CCTGGAGGTT TGTGTAAAGA AATATGGCTT TAAGGGCATC
CGGATCTATC CCAAATACCA CGATTTTGGC ATTACCGACC CGGCATGTAT TGAGCTGGTA
AAAAGGGTGC GCGACTACGG CCTGCCGGTG GCATTCAATT TCCGGATGGT CGACAGCCGG
CAGCGGTCCT GGATGGACAT CGATTATGTG GTAGGCACGC CGAAACCAGA ATGGAACCTG
AAAAACATTT TGCCGATAGT AAGGGAAGTC CCGGATGCCA AATACATGAT CCTGAACTTT
GCCAACAATG CAGCGCTGAA TGATGAAGAA ATGGGCCTCG TAAAGAAAAG CAATTTGCTG
TTCGATACTT CGGGACGGGC CATTACCAAT ATGGCCGAAT TTATTGACCG CTACGGTAAA
GATAAGTTTG CTTTTGGCAC ACATGCACCC ATTTTAGATT ACCTGACCGG ACAATTGCGC
ATAGAATCTA TGGGACCCTC TGAAACAGAT GCACAGACCA AAGAGCTGTT AAGGTCGGGG
AACGCAAAAA AGATGCTCGG AATATAA
 
Protein sequence
MLIDINAYVG HWPFQQLKYN TCEGLLGRMN KFGVDSSVIS NLNGIFYKNT ASANEELYDE 
IRSNRKFGDR FIPFGVINPI YAGWKDDLEV CVKKYGFKGI RIYPKYHDFG ITDPACIELV
KRVRDYGLPV AFNFRMVDSR QRSWMDIDYV VGTPKPEWNL KNILPIVREV PDAKYMILNF
ANNAALNDEE MGLVKKSNLL FDTSGRAITN MAEFIDRYGK DKFAFGTHAP ILDYLTGQLR
IESMGPSETD AQTKELLRSG NAKKMLGI