Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0340 |
Symbol | |
ID | 8251425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 396853 |
End bp | 397659 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644933988 |
Product | amidohydrolase 2 |
Protein accession | YP_003090626 |
Protein GI | 255530254 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGATTG ATATCAATGC GTATGTTGGC CACTGGCCAT TTCAGCAGCT TAAGTACAAT ACCTGCGAGG GGCTATTGGG CCGGATGAAT AAGTTTGGGG TCGATAGCTC TGTGATCAGC AACCTGAATG GCATTTTTTA TAAAAATACA GCCTCCGCAA ATGAAGAACT ATACGATGAG ATCAGGTCTA ACCGGAAGTT TGGCGATCGG TTTATCCCTT TCGGTGTCAT CAACCCCATC TATGCCGGCT GGAAAGATGA CCTGGAGGTT TGTGTAAAGA AATATGGCTT TAAGGGCATC CGGATCTATC CCAAATACCA CGATTTTGGC ATTACCGACC CGGCATGTAT TGAGCTGGTA AAAAGGGTGC GCGACTACGG CCTGCCGGTG GCATTCAATT TCCGGATGGT CGACAGCCGG CAGCGGTCCT GGATGGACAT CGATTATGTG GTAGGCACGC CGAAACCAGA ATGGAACCTG AAAAACATTT TGCCGATAGT AAGGGAAGTC CCGGATGCCA AATACATGAT CCTGAACTTT GCCAACAATG CAGCGCTGAA TGATGAAGAA ATGGGCCTCG TAAAGAAAAG CAATTTGCTG TTCGATACTT CGGGACGGGC CATTACCAAT ATGGCCGAAT TTATTGACCG CTACGGTAAA GATAAGTTTG CTTTTGGCAC ACATGCACCC ATTTTAGATT ACCTGACCGG ACAATTGCGC ATAGAATCTA TGGGACCCTC TGAAACAGAT GCACAGACCA AAGAGCTGTT AAGGTCGGGG AACGCAAAAA AGATGCTCGG AATATAA
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Protein sequence | MLIDINAYVG HWPFQQLKYN TCEGLLGRMN KFGVDSSVIS NLNGIFYKNT ASANEELYDE IRSNRKFGDR FIPFGVINPI YAGWKDDLEV CVKKYGFKGI RIYPKYHDFG ITDPACIELV KRVRDYGLPV AFNFRMVDSR QRSWMDIDYV VGTPKPEWNL KNILPIVREV PDAKYMILNF ANNAALNDEE MGLVKKSNLL FDTSGRAITN MAEFIDRYGK DKFAFGTHAP ILDYLTGQLR IESMGPSETD AQTKELLRSG NAKKMLGI
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