Gene Phep_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0339 
Symbol 
ID8251424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp395889 
End bp396863 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content46% 
IMG OID644933987 
Productamidohydrolase 2 
Protein accessionYP_003090625 
Protein GI255530253 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAA GGAAATTTTT TGCCAGTACC GGACTTTCAG CGGCCGGGCT GATCGTATCA 
GAAAGCCTTT TTGGAATAAA TTCAAAGGTA GAAACTGCGC AGGCCAGCAC CAGTGCCCTG
GCTGGCAGGT ACGACATCAT GAAAGAAGTG ATGAAGTACC CTAAAATAGA TGCCCATGTG
CATGTTGATC TTGGAAACAG TGATCCGGCG GCACAAAAGA AGTTTGCTGA AGTGCTGATC
GATTATGCAG ACCGGCTCAA TATCCGGAAA CTGGTCCTTT CAAAGCCGGT AACCAGGCTC
ATCAAAGGGA TTCCGGATGG CAGCGTGGAA GCATTTATCG ACCACAACAA CATCATACTT
GGTGTGATGA AGCTGCATCC CGACCGGTTT ACCGGGAGCT TTACCTTTAA TCCGGTACAC
CTTAAGGAAT CCATGGATGA AATCAAGAGA TGCGTTGACC AGGGGATGGT TGGCGCAAAA
ACCTATTACC AGACAAAGAT CAGCGATCCG GCATTCTATC CGATAGTGGA AAAAATGATC
GACCTGAAAA TGATCATCCA TACCCATGCC GAAACGCAGC TGGGCGTGGG CGGCTACCGC
ATGATATACG ATGGGCGCAA ACCCCTGAAT GTGTCTATCC CGGAAGATTT TGTGGCCATT
GCCAAAAGAT ACCCGGAAGG TATGTTCCAG CATGCGCATA TAGGCGGTGG AGGCGATTGG
GAGTACATGT GCAAAGCCTT AAAACACAGT CCGAATGTAT ATGTTGACAC TTCGGGAAGT
AACAACGAAG AATGGATGAT TGATTTTGCA TTGCAGGAGC TTGGAGAAGA CCGTCTGCTT
TTTGGTTCTG ACAATATGTA TTACCAGAGT GTAGGCAAGA TCCTGGCTTC TAACCTGAAT
GAAAGCCAGA GAAAAAAGAT ATTTTTTGAA AACTTTAACA ATATTTTAAG AAAAGGAGGA
CACCATGTTG ATTGA
 
Protein sequence
MNRRKFFAST GLSAAGLIVS ESLFGINSKV ETAQASTSAL AGRYDIMKEV MKYPKIDAHV 
HVDLGNSDPA AQKKFAEVLI DYADRLNIRK LVLSKPVTRL IKGIPDGSVE AFIDHNNIIL
GVMKLHPDRF TGSFTFNPVH LKESMDEIKR CVDQGMVGAK TYYQTKISDP AFYPIVEKMI
DLKMIIHTHA ETQLGVGGYR MIYDGRKPLN VSIPEDFVAI AKRYPEGMFQ HAHIGGGGDW
EYMCKALKHS PNVYVDTSGS NNEEWMIDFA LQELGEDRLL FGSDNMYYQS VGKILASNLN
ESQRKKIFFE NFNNILRKGG HHVD