Gene Phep_0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0337 
Symbol 
ID8251422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp394055 
End bp394921 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content44% 
IMG OID644933985 
Productamidohydrolase 2 
Protein accessionYP_003090623 
Protein GI255530251 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGGA ACAGGTTTGC CGGGCTGATG TCCGATAAGG TTGCTGCTGC CCGTTACGAT 
GTAATGAAGG AAGCTTTAAA ATATAGAAAG ATCGATGCTT ATGCCCATGC CTATACTCAG
GATGCGCAGG CAAAAGTACA ACTGGCCTAT GCGGATGATC TGGGTATCGA AAAACTCATC
ATCTCTGTGC CCATAGCCAA AAAAATGGGC GAAACACCTG CAGAATTTAA AGCTTATAAC
AACCAGGTAC TTCAGGCCAT GAAGCGGTAT CCCGGCAGAT TGATCGGACA GGTGACCATT
AATCCCGTAT ATCAGAAAGA GTCGCTGGAA GAGATCCGTC GCTGCACAGA CCAGGGCATG
ATTGGTATGA AACTTTATAA CCAGGTGAGG ATCAATAACC CGGTTTTTTA TCCCGTAATT
GAAAATTTTA TAGATTACAA CATGATCATC CACGTACATG GCGAAAGTCA GCTTGGTGTT
GGCGGTTACC GGATGAAATA TGATGTAAAA ACCACACCAG AAATATCCCT GCCTGAAGAT
TTTGCCGACA TGGCAAAAAG GTATCCTGAG GCCATGTTTC AATATGCCCA TATTGGCGGG
GGCAGTGACT GGGAGTATGC CTGTAAGGCA TTTAAAAATC TGCCCAACAT TTATGTAGAT
ACCGGGGGTA GCAACAATGA AGAGCACATG ATTGATTTTG CGGTAAAAAC ACTGGGTGAA
GACAGGGTGC TTTTTGGATG TGACGGAGCT TACTTACAGG GACTGGGCAA GATCATTTCG
TCAGGCTTAA GTGAAAACCA GAAACAAAAG GTCTTTTTCG GAAACTACAA TAACATTTTA
AGAAAATCGG GACGAAACAT CAGGTAA
 
Protein sequence
MLGNRFAGLM SDKVAAARYD VMKEALKYRK IDAYAHAYTQ DAQAKVQLAY ADDLGIEKLI 
ISVPIAKKMG ETPAEFKAYN NQVLQAMKRY PGRLIGQVTI NPVYQKESLE EIRRCTDQGM
IGMKLYNQVR INNPVFYPVI ENFIDYNMII HVHGESQLGV GGYRMKYDVK TTPEISLPED
FADMAKRYPE AMFQYAHIGG GSDWEYACKA FKNLPNIYVD TGGSNNEEHM IDFAVKTLGE
DRVLFGCDGA YLQGLGKIIS SGLSENQKQK VFFGNYNNIL RKSGRNIR