Gene Phep_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0335 
Symbol 
ID8251420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp391364 
End bp392485 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content48% 
IMG OID644933983 
Productblue (type 1) copper domain protein 
Protein accessionYP_003090621 
Protein GI255530249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGTTTT TCTTTCTGCA GGCCATGCAG CTCATGGCGC AGGGCAATGA TGGCGTAACT 
GAAGTTACAC TGAAAGTAAT GCCGGGTTTA CAGTTTGATG TGGTCAGGTT TACGGTAAAA
CCAGGCGCAT TGGTAAAACT CAGTTTTACC AATACAGACG ATATGAGCCA TAATTTATTG
ATCACAAAGC CCGGAAAAAG GCTGGCAGTG GTCAATGCAG CACTGCAGCT GGAGGAAAAA
GGCCCGGCAA TGAATTATAT CCCGAAATCT TCCGATGTTT TGTGGTCTGT TCCGATACTG
TCGCCTGAAC AAACTAAATC CCTTAGCTTC AAAGCACCGC TGCAGGCCGG GGCATATCCT
TACGTATGTA CCTATCCCGG GCATGGTTTT GTGATGTATG GCGTAATGTA TGTAAATGCT
GAGGGTAAGA TGCCGGAGCT TAAAAATGAT CCAAATATCC CTCCTGCAAG ACAGGAGGAC
AAGCTTGCTG ACGCCGGTAA ACACGACATG CACCATGCAC ACCAGCAAGA AATGCCCAAA
GCAGATCATC CTTATGCAAC AGTACCACCC TATTTATACC GCATATTTAT GGAGGATGCC
AGCCCAGCGG CCATAGCGGT CAGCTTGCCC CAAAACCTGT CCTACTGCTG GGATGCCGGT
GTATGCAGGT TACGGTACGC CTGGAAAGGT GGGTTTGTAG ACAATACAGC CCTATGGAAG
GGACATGCCG ACGCTACGGC AAAAATAATC GGGACAATCT TTTACCGCGA TAAAACCACC
TATCCTTTGA GGGTCGGAGA TCCGGATGCC ATCCCTGTAA CTGAATACAA GGGCTATCGG
TTGGTTGAAA AATATCCGGA GTTTCATTAT ACACTCAATG GCATTGATGT ATATGAGCTT
ATTTTACCAA AAGAAGACGG CAAAGGACTG GTACGGAAAT TCAGGATCCC GGATGCAAAC
AAGGAGGTCT GGTTTGCCGC TAACCTACAC GATGAGGCTG TCACATACGA AGCCTCGGCA
GGTAACTGGG ACCATGAAAA ACTGCGGCTC AATCCGCAGC AGGCCCGCGA ATTTACCCTC
ATCATGACCA GCTATCCTTT AGTTTACAGT AGAAAAAAGT AA
 
Protein sequence
MLFFFLQAMQ LMAQGNDGVT EVTLKVMPGL QFDVVRFTVK PGALVKLSFT NTDDMSHNLL 
ITKPGKRLAV VNAALQLEEK GPAMNYIPKS SDVLWSVPIL SPEQTKSLSF KAPLQAGAYP
YVCTYPGHGF VMYGVMYVNA EGKMPELKND PNIPPARQED KLADAGKHDM HHAHQQEMPK
ADHPYATVPP YLYRIFMEDA SPAAIAVSLP QNLSYCWDAG VCRLRYAWKG GFVDNTALWK
GHADATAKII GTIFYRDKTT YPLRVGDPDA IPVTEYKGYR LVEKYPEFHY TLNGIDVYEL
ILPKEDGKGL VRKFRIPDAN KEVWFAANLH DEAVTYEASA GNWDHEKLRL NPQQAREFTL
IMTSYPLVYS RKK